Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1371 224 2e-56 >seq1371 Length=1170 Score = 224 bits (248), Expect = 2e-56 Identities = 199/245 (81%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||||| Sbjct 736 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 795 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | |||| | | | ||||| |||||| | ||| || ||||||||||| Sbjct 796 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 854 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 855 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 914 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 915 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 973 Query 314 AGGGG 318 |||| Sbjct 974 GGGGG 978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185686272