Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1227 212 3e-52 >seq1227 Length=1636 Score = 212 bits (234), Expect = 3e-52 Identities = 207/261 (79%), Gaps = 7/261 (3%) Strand=Plus/Minus Query 427 CAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAACCCGTGCG-CGTAATGAAAG 484 |||||||||| |||| | ||||||| ||| | |||||||| | || || ||| Sbjct 1636 CAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGC 1577 Query 485 TGAACGGAGGTGGGAACC-CGTGAGGGT-GCACCATCGACCGATCCTGATGTCTTCGGAT 542 ||| || ||||| || | || |||| ||||| ||||||| |||||| | || || Sbjct 1576 TGATTGG---TGGGATCCTCTTGTGGGTTGCACCGCCGACCGACCCTGATCTTTTGTGAA 1520 Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602 || || |||| |||||||| |||| |||||||||||||||||||||||||||||| || Sbjct 1519 GGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGG 1460 Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 | ||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| |||| Sbjct 1459 GCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGT 1400 Query 663 CAAATTTGGGTATAGGGGCGA 683 | |||||||||||||||| Sbjct 1399 ATGACTTGGGTATAGGGGCGA 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079966452200