Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1227 212 3e-52
>seq1227
Length=1636
Score = 212 bits (234), Expect = 3e-52
Identities = 207/261 (79%), Gaps = 7/261 (3%)
Strand=Plus/Minus
Query 427 CAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAACCCGTGCG-CGTAATGAAAG 484
|||||||||| |||| | ||||||| ||| | |||||||| | || || |||
Sbjct 1636 CAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGC 1577
Query 485 TGAACGGAGGTGGGAACC-CGTGAGGGT-GCACCATCGACCGATCCTGATGTCTTCGGAT 542
||| || ||||| || | || |||| ||||| ||||||| |||||| | || ||
Sbjct 1576 TGATTGG---TGGGATCCTCTTGTGGGTTGCACCGCCGACCGACCCTGATCTTTTGTGAA 1520
Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602
|| || |||| |||||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 1519 GGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGG 1460
Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
| ||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||
Sbjct 1459 GCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGT 1400
Query 663 CAAATTTGGGTATAGGGGCGA 683
| ||||||||||||||||
Sbjct 1399 ATGACTTGGGTATAGGGGCGA 1379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079966452200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |