Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1083 93.3 1e-16 >seq1083 Length=2802 Score = 93.3 bits (102), Expect = 1e-16 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 445 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 386 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419 | || ||| | || | ||| |||| || ||| | | | | | || ||||| Sbjct 385 GATGCAAAAATGTGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 326 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 325 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 266 Query 480 CGGTGAAT 487 |||||||| Sbjct 265 CGGTGAAT 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503976477440