Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq307 205 2e-50
>seq307
Length=625
Score = 205 bits (226), Expect = 2e-50
Identities = 125/133 (94%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 566
Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||||||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||
Sbjct 565 TTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTC 506
Query 281 ATGGTTTGTATTC 293
| |||| ||||||
Sbjct 505 ACGGTTCGTATTC 493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854386637184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |