Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1371 601 1e-169 >seq1371 Length=1170 Score = 601 bits (666), Expect = 1e-169 Identities = 444/511 (87%), Gaps = 9/511 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| ||| |||||| |||| |||||||||||||||||| Sbjct 510 GTACTCATTCCAATTACCAGACTCAAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 452 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 451 CCCCGTGTTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 392 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 391 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 332 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 331 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 272 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG----GGCG 295 | |||||| |||||| || |||||| |||||||| ||| | | | || ||| Sbjct 271 CAAAGGCCGTGCGATCCGACGAGTTATCATGAATCATCAAAGCAACAGGCAGAGCCTGCG 212 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 ||| ||||||||||||||| || ||||||| |||||||||||| | ||| ||||||| Sbjct 211 TTGACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGGTTTGTTGCACGTATTAG 152 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| ||||| || ||| |||||| |||| |||||||||| Sbjct 151 CTCTAGAATTACTACGGTTATCCGAGTAGT-AGATACCATCAAACAAACTATAACTGATT 93 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473 ||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||||| Sbjct 92 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 33 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 32 ATCTTTGAGACAAGCATATGACTACTGGCAG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510376377344