Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq211 389 3e-103 seq1201 251 6e-62 >seq211 Length=153984 Score = 389 bits (430), Expect = 3e-103 Identities = 1163/1755 (66%), Gaps = 80/1755 (5%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| || ||||| || | |||||| || | || | || ||||||||||||||| Sbjct 108010 TCGACGGTAAACTGAATGGGGGCAGCAGCAGCTTGCGTGCGCAGGTAGTACATGCCGGTC 108069 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 || || || ||| ||| | ||||||||| | | | || |||| | |||| | Sbjct 108070 TTCAGCCCTAGCTT-CCAGCCTGCGAAATGCAT-GCTAGTGATCTTGCCCATGGTCGGGT 108127 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | ||||| ||| ||||| | ||||| || || |||| Sbjct 108128 CTTTCATGTGAATGTTGAGGGACTGGGACTGGTCGATAAAGGCGCCACGGTCGGCGGCCA 108187 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || || |||| || || ||||||||||| ||||||||| | | | ||||| Sbjct 108188 TCTGAACGACGGTACGTTGGGAAATTTCCCAGACGGTTTTGTACAGG-GCCTTGACCTCG 108246 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||| | ||||| ||| || || ||| ||||||||||| || ||| Sbjct 108247 GCGGGAATGTTGGGAATGTTCTGCACGGAGCCATTCTCAGCAATAATGCGGTTCTTCATG 108306 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430 | || |||||||| |||| |||| || | | || ||||| | |||| || Sbjct 108307 GCATCAGACCACAAGCCCATGTCGACGAGGTCCTTGAGGAGCCAAGGG----TTGACAAC 108362 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 || ||||| || | || || ||||| ||||||||||| ||| || |||||| | Sbjct 108363 CTGAAACTCACCAGCCAAGACGCGACGCTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCA 108422 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 ||| ||||||| ||||| |||| |||| || ||||||||||| ||||| | ||| Sbjct 108423 TTCGTTGTTGCCCAGAATCTGGGAAGTACTGGCGGTTGGCATGGGGGCGACGAGCAAGCT 108482 Query 65551 GTTTCGCAATCCGTTCATTTCAAT--GTTG--TGACGCAATTCGTCCCAGTTCCACA--T 65604 ||| |||| || | | | || ||| ||| ||| |||||| ||| | | Sbjct 108483 GTTACGCACACCATGCTGCTTGATCTGTTCCTTGAGAGAAT----CCCAGTCCCAGAGGT 108538 Query 65605 CGGTTTATCG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTG 65659 ||| | | | ||| ||| |||||| || | ||| ||| || || |||| Sbjct 108539 CGG---AGGGCTTGAC-TCC-----CCACATGTCATATTGAAGGACGCCCTGTGAGACTG 108589 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGC--TG 65716 | || | | | || | || |||||||||||||| || || || | || Sbjct 108590 G--GGAGCCTTCATAAGACGAA--TAGGTGCCCTCCTCCTTGGCTAGCTGCACTGACATG 108645 Query 65717 GTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTC 65775 || ||| || || || ||||||||||| || | || || |||||||| ||||| Sbjct 108646 GT---GAGAGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTCAGTTCACGAGCCTC 108701 Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTG--TCGGCCAGACCTTGAACTCCA 65833 | |||| |||||| | || | | ||| | || || || ||||| || || || Sbjct 108702 AGGCGACTCGAACGGCAGTCGCA--AAGCCAAGAATGCATCAGCAAGACCCTGGACACCG 108759 Query 65834 ATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTG 65893 | || ||||| ||||| |||| ||| | ||||| || || || |||| ||| Sbjct 108760 AGGCCAATGGGCCGATGGCGCATGTTGCTGTTGCGAGCCTCCGGGACGGGATAGTGGTTG 108819 Query 65894 ATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTC 65952 | ||||| || | ||||| ||||| || || || || | ||| | | | | Sbjct 108820 ACGTCGATGATCCTATTCAGGTTGCGAACAACAACCTGGGTGACATCGT-GTAGCTTCTG 108878 Query 65953 GAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAG 66012 ||| ||| | | || | || | | ||| | || | | || || ||||| Sbjct 108879 GAAGTCATA--GATTCCGTCGCT--GTAGTTCACGAAAGAA--------GGGAGAGCAAG 108926 Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 || || | ||||||||| || | ||||||||| || | ||||| | ||||| ||||| Sbjct 108927 GGACGCCAAGTTGCAGACGGCGACCTCGTCAGGGGCCGAGTACTCAATGATTTCCGTGCA 108986 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG-CATGCAT 66131 || || || || |||||||| | ||||| || || |||||||| ||| |||| || Sbjct 108987 AAGGTTGGAGCTTCGAATGGTGCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCATG-AT 109045 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||| | || ||||||||||| |||| ||| | ||||| | ||| | Sbjct 109046 CCTTGTAGAGCATGAAAGGGTTGCCGGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA 109105 Query 66192 GAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGG 66250 | | ||||||| || | | | |||| |||| ||| ||||| | ||||| | | Sbjct 109106 GCTTCTGGGCCTTCATGGT-CTTTCGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAG 109164 Query 66251 TGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGGACACTTGTGTGGACACATCA 66308 |||||| | | | ||||| |||| |||| || |||| || |||||||||| Sbjct 109165 GCTTCGAAT--TCCTCGCCATAGCAGTCGGCAAGACCCGGGCACTCGTTGGGACACATCA 109222 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 | | ||| ||||| | || || || || ||| || |||||||| ||||| |||||| Sbjct 109223 GTGTCCAGTCACCGTTCTTCTCCACTCGCTTCATGAAGAGATCAGGGATCCAAAGGGCGA 109282 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 ||| || || || || || |||||| ||||||| || ||||| | ||| | |||| Sbjct 109283 GGAAAAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCCAAAAACT 109342 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 | |||| |||||||||||| || || ||||||||||| || | || || ||| || Sbjct 109343 CGAAGACGTCGGCATGCCAGGGCTCGAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGC 109402 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 |||| |||||||| ||||| ||| ||||||||||| || | ||| || | |||| Sbjct 109403 CACCCTGGTCGACATAGCGGGCGGTGTTGTTGAAGACGCGGAGCATAGGGGTAACACCGT 109462 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 | || |||||||||||||| ||||| ||| || || || || ||| ||||| | Sbjct 109463 TGGAGGTGCCATTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGGTGGACATTTA 109522 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGC-CACTGTCCGGAATAT 66666 ||||||| || |||||| | || || || || || || | | |||| | | || Sbjct 109523 GACCAATGCCGCCGGCCATTTTTGATATCATGGCGCAGGTCTTCAGAGTGTC--GTAGAT 109580 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 ||| ||||| ||||| |||| ||| | ||| |||| || || || | | ||| Sbjct 109581 GCCCTCAATAGAGTCTTCCTTCATGTCGACGAGAAAGCAGGACGACAGCTGTGCCTGGGG 109640 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 || |||| ||| | ||||| | |||||| || ||| | | || ||||| | || Sbjct 109641 AGTACCGGCGTTGAACAATGTGGGCGAAGCGTGGGTGAAGCACTTGCTCGACATCAAGTT 109700 Query 66787 GTACGTCTCGATGAC 66801 ||| ||||| ||||| Sbjct 109701 GTATGTCTCAATGAC 109715 >seq1201 Length=295393 Score = 251 bits (278), Expect = 6e-62 Identities = 580/857 (68%), Gaps = 24/857 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || || || |||||||| | |||||| | |||||| Sbjct 157055 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCTGAGGAGATTGATTTG 156996 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | | | | ||| | ||| | | ||||| Sbjct 156995 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAT-GATGAGAAGTACTTCATCTC 156937 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| |||||||| ||||| |||||||||||||| | | || || Sbjct 156936 TCACATTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAATGAGAACCTGGTTGAGCG 156877 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | || || || || | |||||||| || ||||||||||||||||| || Sbjct 156876 TTTCTCTGGCGAAGTCCAGGTCCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 156817 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| | ||||| |||| ||| |||||||||| || ||||| | ||||| || Sbjct 156816 GGAGAACATTCACTCCGAGACTTACTCCCTTCTCATCGACACCTACATTAAGGAGCCTGC 156757 Query 61383 GGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 | ||| | | || | ||||| |||||||| || || || | | | || ||| | Sbjct 156756 CCAGCGT-ACCTATCTCTTCAACGCCATCGACACCATCCC--CTG-CATCCGTAAGAAGG 156701 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGG 61498 | || |||||||| |||||||| |||| | | || || | | || | | | Sbjct 156700 CTGACTGGGCCTTGCGCTGGATCACGGACACAAAGTCCACCTTCGCCCAGCGCCTCGTTG 156641 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | |||||||| | || ||||| || | || ||| | ||||| ||| | | Sbjct 156640 CCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTCA 156581 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| ||||| || ||||||||||| |||||| ||| ||| | || || || || |||| Sbjct 156580 AGAAGCGTGGTCTCATGCCCGGTCTAACCTTCTCCAACGAGCTCATCTCCCGTGATGAGG 156521 Query 61619 GCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTC 61676 | | || || |||| ||| || || | || || | ||| | | || || Sbjct 156520 GTCTCCACACCGACTTTGCCTGCCTT-CTGT----ACTCTCACCTGAAGCACCGCCCCAG 156466 Query 61677 GGAGGAGCGTG-TGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTG 61734 || || ||| | | || ||| |||| || || || | ||||| || || || ||| Sbjct 156465 CAAGCAG-GTGATTGAGGATATT-ATCGTCGATGCTGTCAAGATCGAGCAAGAGTTCCTG 156408 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| |||| | | ||| | |||||||| | || ||| ||| || || Sbjct 156407 ACCGAGGCTCTGCCTTGCGCCCTCCTGGGCATGAACTCCAACCTGATGAAGCAATACATC 156348 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || || || ||||||||||||| | | || | | | |||| || || Sbjct 156347 GAGTTCGTCGCTGATCGTCTGTTGGTCGCTCTCGGCAACGACAAGGTCTACAAATCGGCC 156288 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | ||||||||| || || || ||||| Sbjct 156287 AACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTCTTTGAGAAG 156228 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| | |||||| || Sbjct 156227 CGTGTCGCCGACTACCA 156211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560421856960