Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq456 113 5e-20 >seq456 Length=562 Score = 113 bits (124), Expect = 5e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 160975 CTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTTGC 161034 |||||| |||||| |||| || |||| || ||||| || | |||||| |||| Sbjct 293 CTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGT 352 Query 161035 TCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTCCTG 161094 ||| | ||||||||||| ||| | ||| || |||||||||||| |||||||| Sbjct 353 TCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTT 412 Query 161095 GATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCTGAT 161154 |||||||| || ||||| || ||||| || || || ||||||||||| | |||||| Sbjct 413 GATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAGTCTGAT 472 Query 161155 GT 161156 || Sbjct 473 GT 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551365220599200