Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq456 82.4 9e-11 >seq456 Length=562 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 50156 TGTTCCTCTTGTGCTGGTAAAATCATTGAGGGTACTGTTGACCAGGAAGATCAATCATTT 50215 ||||| || |||||||||||| | ||| |||| ||||| || ||| || || Sbjct 350 TGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTC 409 Query 50216 CTTGATGATGATCAACTTGAAGCTGGTTTTGTCTTGACATGTGTAGCTCGTCCTACTTCG 50275 ||||||||||| || |||||| ||||||||| | || ||||| ||| ||||| || Sbjct 410 CTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAGTCT 469 Query 50276 GACTGTACTATTGAAACAGGAAAAGAAGAAGAACT 50310 || | |||||| || || ||||||||||| Sbjct 470 GATGTTGTTATTGAGACTCACAAGGAAGAAGAACT 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559317065137600