Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1079 109 2e-18 >seq1079 Length=328518 Score = 109 bits (120), Expect = 2e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 ||||||||||||| ||||| || | | | ||||||||||||||||| || ||||| | Sbjct 14302 CAATAGTCATACGGGAGGGGATAGCGTGGGGGTTGATGATGATGTCGGGGGTGATGCCCT 14361 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 ||||||| |||||||| || || | || ||| ||| || || ||||| || ||| Sbjct 14362 CAGCGGTGAAGGGCATGTCCTCTTGGCGATATGTGACACCGATCGTACCCTTCTGACCAT 14421 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||| || ||||||||||| ||||| Sbjct 14422 GGCGGGACGCAAACTTGTCACCAAT 14446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884848629232652