Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1170 405 4e-108 >seq1170 Length=97779 Score = 405 bits (448), Expect = 4e-108 Identities = 1148/1742 (66%), Gaps = 54/1742 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | | || ||| |||| || | || ||||||||||| ||| Sbjct 61071 TCGACGGTGAACTGAATGGGAGCAGAAGCTGCCTGAGTACGCAGGTAGTACATGCCCGTC 61012 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| ||| || ||| ||||| | || | || |||| | | |||| || Sbjct 61011 TTGAGACCAAGCTTCCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGTCGGGTC 60953 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||||| ||| || ||| | ||||||||| |||||||| Sbjct 60952 CTTCATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAGGCACCACGATCGGCAGCCAT 60893 Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312 | ||| | | || | || || |||||||||||||||||||| | | | |||| Sbjct 60892 CTGAACAACGGTGCGCTGG---GAGATTTCCCAGACGGTCTTGTACAGA-GCCTTGACCT 60837 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 | || || | |||| ||| || ||||| || || || || || || Sbjct 60836 CGGCGGGGATGTTAGGGATGTTCTGAACGGAACCGTTCTCGGCGATGATACGGTTCTTCA 60777 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | | || |||||||| |||| |||| ||||| | | || | |||| || | Sbjct 60776 TGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTCAGCAGCCAGGGGTTGACAACCT 60717 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||||| || ||||| || ||||||||||| ||| ||| || ||| | | Sbjct 60716 GGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACT 60657 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| | || |||| ||| || ||||| ||||||||||| || | ||| || Sbjct 60656 CGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGCAACAAGCAAACTGT 60597 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | || | | || |||||||| ||| | ||| Sbjct 60596 TGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAGTCCCAGTCCCAGA--GGTCAGA 60539 Query 65613 CGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT----G 65666 | | ||||| | ||||| || | || ||| | || |||| | | | Sbjct 60538 GGGCTTGACATTC------CACATGTCGTACTGAAGGATACC----CTGGGAGATAGGGG 60489 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGC---TGGTCTCGA 65723 | || | | | ||| ||||||||| |||| |||||| | ||||| | Sbjct 60488 AGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGACATGGTC---A 60432 Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCG-ATTAAGTTCACGTGCCTCATCGCTC 65782 | ||||| || |||||||| ||||| | || ||| || || || |||||| | Sbjct 60431 GAGCGGCGTGGTAGATGGTCTCAAAAAT-CTTCTTATTGAGATCGCGAGCCTCAGGAGAC 60373 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 ||| | ||||| | | || || | || || ||||| || || |||| ||||||| Sbjct 60372 TCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAGACCGATG 60313 Query 65843 GGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 || || ||||||| ||| | |||||||| || ||||||| |||| ||| || Sbjct 60312 GGGCGGTGACGCATGTTGCTGTTGCGAGCCTCAGGAACGGGGTAGTGGTTGACATCAATG 60253 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAA 65962 || |||| ||||| || || || || | ||| | ||| | ||| Sbjct 60252 ATCTTGTTCAGGTTGCGAACAACGACCTGAGTGA--CCTCGTGAAGCTTC----TGGAAA 60199 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | | | || || | || | | || || | || ||||||||||| || | | Sbjct 60198 TCGTAAACACCCTC---ATTGTAGT---CAACGAAGGTAGGCAGGGCAAGAGAGGCCAAG 60145 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||||||||| | ||| || || ||| ||||| | ||| || ||||| || || | Sbjct 60144 TTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTGGAG 60085 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||| ||||| || | |||| ||| || |||||||| || ||||||||||| | | Sbjct 60084 CTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAAAGC 60025 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||| | || ||||||||||| || | ||| | |||||||| |||||| | ||| Sbjct 60024 ATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGGGCC 59965 Query 66203 TTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261 || | || | | | |||| || | ||| ||||| | |||||| | | || || Sbjct 59964 TTGATGGT-CTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTCAAACTC 59906 Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 || || | || | ||| | || |||| || || ||||| || | ||| || | Sbjct 59905 CTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCATTCGGC 59846 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | || || || | ||| || ||||| || |||||||||||| ||| || || || Sbjct 59845 GTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTCACG 59786 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||| ||||||| || ||||||||||| | |||||| |||| ||||| Sbjct 59785 GGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGACATCGGC 59726 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 ||||| || || |||||||||||||| | || ||| ||| |||||| |||||||| Sbjct 59725 GTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGAC 59666 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 ||||||||| |||||||||||||| | ||| || | || |||||||| |||| || Sbjct 59665 GTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGAGGTGCCGTT 59606 Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 ||||||| | ||| ||| || || || ||| |||| | || || ||||| ||||| Sbjct 59605 GGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGGCCAATGCCACC 59546 Query 66622 GGCCGTCTTCGAGATGGCAGCACAA-TCG-GCCACTGTCCGGAATATGCCGTCAATGGAG 66679 ||| |||| ||||| || || || | |||| | | || || ||||||||| Sbjct 59545 AGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTC--GTAGATACCCTCAATGGAG 59488 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| ||| | |||| |||||||| || ||| | || || |||| | Sbjct 59487 TCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACCGGCATTG 59428 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || || ||||| | ||||| || ||| | | || |||||| ||||| ||||||||| Sbjct 59427 AAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTCGATG 59368 Query 66800 AC 66801 || Sbjct 59367 AC 59366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559186290160