Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 405 4e-108
>seq1170
Length=97779
Score = 405 bits (448), Expect = 4e-108
Identities = 1148/1742 (66%), Gaps = 54/1742 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | || ||| |||| || | || ||||||||||| |||
Sbjct 61071 TCGACGGTGAACTGAATGGGAGCAGAAGCTGCCTGAGTACGCAGGTAGTACATGCCCGTC 61012
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| || ||| ||||| | || | || |||| | | |||| ||
Sbjct 61011 TTGAGACCAAGCTTCCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGTCGGGTC 60953
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||||| ||| || ||| | ||||||||| ||||||||
Sbjct 60952 CTTCATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAGGCACCACGATCGGCAGCCAT 60893
Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312
| ||| | | || | || || |||||||||||||||||||| | | | ||||
Sbjct 60892 CTGAACAACGGTGCGCTGG---GAGATTTCCCAGACGGTCTTGTACAGA-GCCTTGACCT 60837
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
| || || | |||| ||| || ||||| || || || || || ||
Sbjct 60836 CGGCGGGGATGTTAGGGATGTTCTGAACGGAACCGTTCTCGGCGATGATACGGTTCTTCA 60777
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| | || |||||||| |||| |||| ||||| | | || | |||| || |
Sbjct 60776 TGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTCAGCAGCCAGGGGTTGACAACCT 60717
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||||| || ||||| || ||||||||||| ||| ||| || ||| | |
Sbjct 60716 GGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACT 60657
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
| ||||||| | || |||| ||| || ||||| ||||||||||| || | ||| ||
Sbjct 60656 CGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGCAACAAGCAAACTGT 60597
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612
| || | |||| | | || | | || |||||||| ||| | |||
Sbjct 60596 TGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAGTCCCAGTCCCAGA--GGTCAGA 60539
Query 65613 CGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT----G 65666
| | ||||| | ||||| || | || ||| | || |||| | | |
Sbjct 60538 GGGCTTGACATTC------CACATGTCGTACTGAAGGATACC----CTGGGAGATAGGGG 60489
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGC---TGGTCTCGA 65723
| || | | | ||| ||||||||| |||| |||||| | ||||| |
Sbjct 60488 AGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGACATGGTC---A 60432
Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCG-ATTAAGTTCACGTGCCTCATCGCTC 65782
| ||||| || |||||||| ||||| | || ||| || || || |||||| |
Sbjct 60431 GAGCGGCGTGGTAGATGGTCTCAAAAAT-CTTCTTATTGAGATCGCGAGCCTCAGGAGAC 60373
Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842
||| | ||||| | | || || | || || ||||| || || |||| |||||||
Sbjct 60372 TCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAGACCGATG 60313
Query 65843 GGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902
|| || ||||||| ||| | |||||||| || ||||||| |||| ||| ||
Sbjct 60312 GGGCGGTGACGCATGTTGCTGTTGCGAGCCTCAGGAACGGGGTAGTGGTTGACATCAATG 60253
Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAA 65962
|| |||| ||||| || || || || | ||| | ||| | |||
Sbjct 60252 ATCTTGTTCAGGTTGCGAACAACGACCTGAGTGA--CCTCGTGAAGCTTC----TGGAAA 60199
Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022
| | | || || | || | | || || | || ||||||||||| || | |
Sbjct 60198 TCGTAAACACCCTC---ATTGTAGT---CAACGAAGGTAGGCAGGGCAAGAGAGGCCAAG 60145
Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082
||||||||||| | ||| || || ||| ||||| | ||| || ||||| || || |
Sbjct 60144 TTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTGGAG 60085
Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142
| ||| ||||| || | |||| ||| || |||||||| || ||||||||||| | |
Sbjct 60084 CTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAAAGC 60025
Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202
||| | || ||||||||||| || | ||| | |||||||| |||||| | |||
Sbjct 60024 ATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGGGCC 59965
Query 66203 TTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261
|| | || | | | |||| || | ||| ||||| | |||||| | | || ||
Sbjct 59964 TTGATGGT-CTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTCAAACTC 59906
Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321
|| || | || | ||| | || |||| || || ||||| || | ||| || |
Sbjct 59905 CTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCATTCGGC 59846
Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381
| || || || | ||| || ||||| || |||||||||||| ||| || || ||
Sbjct 59845 GTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTCACG 59786
Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441
|| || |||||| ||||||| || ||||||||||| | |||||| |||| |||||
Sbjct 59785 GGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGACATCGGC 59726
Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501
||||| || || |||||||||||||| | || ||| ||| |||||| ||||||||
Sbjct 59725 GTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGAC 59666
Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561
||||||||| |||||||||||||| | ||| || | || |||||||| |||| ||
Sbjct 59665 GTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGAGGTGCCGTT 59606
Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621
||||||| | ||| ||| || || || ||| |||| | || || ||||| |||||
Sbjct 59605 GGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGGCCAATGCCACC 59546
Query 66622 GGCCGTCTTCGAGATGGCAGCACAA-TCG-GCCACTGTCCGGAATATGCCGTCAATGGAG 66679
||| |||| ||||| || || || | |||| | | || || |||||||||
Sbjct 59545 AGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTC--GTAGATACCCTCAATGGAG 59488
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
|| |||| ||| | |||| |||||||| || ||| | || || |||| |
Sbjct 59487 TCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACCGGCATTG 59428
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| || ||||| | ||||| || ||| | | || |||||| ||||| |||||||||
Sbjct 59427 AAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTCGATG 59368
Query 66800 AC 66801
||
Sbjct 59367 AC 59366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397559186290160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |