Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq198 96.9 1e-17
>seq198
Length=39678
Score = 96.9 bits (106), Expect = 1e-17
Identities = 135/188 (72%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| |||||||| | ||||||| | |||||| || | | ||||||
Sbjct 36326 CAAGTCATCATGGCCCTTATGTTATGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 36385
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC-----GGATT 419
| |||||| |||| | ||| |||| || ||| | | | | || |||||
Sbjct 36386 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAAAGGATATAAATTATACAAGGATT 36445
Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479
|||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| |
Sbjct 36446 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 36505
Query 480 CGGTGAAT 487
||||||||
Sbjct 36506 CGGTGAAT 36513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503872836800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |