Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq198 96.9 1e-17 >seq198 Length=39678 Score = 96.9 bits (106), Expect = 1e-17 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 36326 CAAGTCATCATGGCCCTTATGTTATGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 36385 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC-----GGATT 419 | |||||| |||| | ||| |||| || ||| | | | | || ||||| Sbjct 36386 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAAAGGATATAAATTATACAAGGATT 36445 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 36446 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 36505 Query 480 CGGTGAAT 487 |||||||| Sbjct 36506 CGGTGAAT 36513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503872836800