Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq2520 163 3e-38
seq2144 118 1e-24
seq3623 107 2e-21
seq3374 107 2e-21
seq2764 107 2e-21
seq2801 98.7 1e-18
seq2485 98.7 1e-18
seq1839 95.1 1e-17
seq2721 93.3 5e-17
seq2287 91.5 2e-16
seq2346 89.7 6e-16
seq3003 86.0 7e-15
seq2707 86.0 7e-15
seq1633 86.0 7e-15
seq2324 84.2 3e-14
seq2313 84.2 3e-14
seq2191 84.2 3e-14
seq1664 73.4 5e-11
>seq2520
Length=6748
Score = 163 bits (180), Expect = 3e-38
Identities = 153/192 (80%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1610 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1551
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | |||
Sbjct 1550 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGCTTCCCCGGCA 1491
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| ||| | | || | ||| | || |||| | |||
Sbjct 1490 CACCCAGTGAAGGGCATGCGGTTCCGCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 1431
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 1430 GTGAGGCGGACC 1419
>seq2144
Length=8075
Score = 118 bits (130), Expect = 1e-24
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| | |||||||||||||||||||| || ||||| ||||
Sbjct 2267 CTAGAAACTAATAAAATAGAACCACACGTCCTATTCTATTATTCTATACTAATATATTTA 2208
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||| | | |||||||||||| | || |||||||||||| |||| |||
Sbjct 2207 AGTATAGGCCTGCCTAAAGCACTCTAATTTTTTTAAAGTAAAAGTCCTGCTTCCCTAGCA 2148
Query 126 CACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|||| | || ||||||||| || || | ||| |||| | ||| | |||
Sbjct 2147 CACCTAGTAAAGGGCATACGGTTCTACAGAGGGAAAGGCCTGGCCAGACTAGTGCACGCA 2088
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 2087 GTGAGGCGGACC 2076
>seq3623
Length=4087
Score = 107 bits (118), Expect = 2e-21
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| ||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 1936 CTAGAAACTAACAAAATAAAACTACACGTCCTATTCTATTATTCTATACTAATGTATTTA 1995
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | || |||||||||||| | || |||||||||||| |||| |||
Sbjct 1996 AGTATAGGCCTACCTAGAGCACTCTAATTTTTTTAAAGTAAAAGTCCTGCTTCCCTAGCA 2055
Query 126 CACC 129
||||
Sbjct 2056 CACC 2059
>seq3374
Length=4591
Score = 107 bits (118), Expect = 2e-21
Identities = 109/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| |||||||||| | |||||||||||||||||||| || ||||| ||||
Sbjct 2279 CTAGAAACTAACAAAATAGAACCACACGTCCTATTCTATTATTCTATACTAATATATTTA 2338
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||| | | |||| ||||||| | || ||||||||||| |||| |||
Sbjct 2339 AGTATAGGCCTGCCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCCCTAGCA 2398
Query 126 CACCAATGAA--GGCATACGG 144
|||| | || |||||||||
Sbjct 2399 CACCTAGTAAAGGGCATACGG 2419
>seq2764
Length=6024
Score = 107 bits (118), Expect = 2e-21
Identities = 109/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| |||||| ||||||||||||| |||||||| ||||
Sbjct 2152 CTAGAAACTAATAAAATAGAACTACACGTCTTATTCTATTATTCTATGCTAATATATTTA 2093
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||| | || |||| ||||||| | || |||||||||||| |||| |||
Sbjct 2092 AGTATAGGCCTGCCTAGAGCACTTTAATTTTTTTAAAGTAAAAGTCCTGCTTCCCTAGCA 2033
Query 126 CACCAATGAA--GGCATACGG 144
|||| | || |||||||||
Sbjct 2032 CACCTAGTAAAGGGCATACGG 2012
>seq2801
Length=5931
Score = 98.7 bits (108), Expect = 1e-18
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||| ||||||||||||| || ||||| ||||
Sbjct 2332 CTAGAAACTAATAAAATAGAACTATACGTCTTATTCTATTATTCTATACTAATATATTTA 2273
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||||| || |||||||||||| | || ||||||||||| ||||| | |
Sbjct 2272 AGTATAGGCCTGCTTAGAGCACTCTAATTTTTTTAAAGTAAAAGTCCTACTTCCTTAGTA 2213
Query 126 CACCAATGAA--GGCATACGG 144
||| | || |||||||||
Sbjct 2212 CACTTAGTAAAGGGCATACGG 2192
>seq2485
Length=6841
Score = 98.7 bits (108), Expect = 1e-18
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| |||||| ||||||||||||| || ||||||||||
Sbjct 4651 CTAGAAACTAATAAAATAGAACTACACGTCTTATTCTATTATTCTATACTAATGTATTTA 4710
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||| | || |||| ||||||| | || ||||||||| || ||||| | |
Sbjct 4711 AGTATAGGCCTGCCTAGAGCACTTTAATTTTTTTAAAGTAAAAGTCTTGCTTCCTTAGTA 4770
Query 126 CACCAATGAA--GGCATACGG 144
|||| | || ||||| |||
Sbjct 4771 CACCTAGTAAAGGGCATGCGG 4791
>seq1839
Length=9459
Score = 95.1 bits (104), Expect = 1e-17
Identities = 106/141 (75%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| |||||| |||| |||||||| || ||||| ||||
Sbjct 5402 CTAGAAACTAATAAAATAGAACTACACGTCTTATTTTATTATTCTATACTAATATATTTA 5461
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||| ||||||| | || ||||||||||| |||| |||
Sbjct 5462 AGCATAGGCCTGCCTAGAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCCCTAGCA 5521
Query 126 CACCAATGAA--GGCATACGG 144
||| | || |||||||||
Sbjct 5522 CACTTAGTAAAGGGCATACGG 5542
>seq2721
Length=6152
Score = 93.3 bits (102), Expect = 5e-17
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||||||||||||||||| || ||||||||||
Sbjct 2313 CTAGAAACTAATAAAATAGAACTATACGTCCTATTCTATTATTCTATACTAATGTATTTA 2254
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | | |||| ||||||| | || |||||||||||| ||||| | |
Sbjct 2253 AGTATAGGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTGCTTCCTTAGTA 2194
Query 126 CACC 129
||||
Sbjct 2193 CACC 2190
>seq2287
Length=7528
Score = 91.5 bits (100), Expect = 2e-16
Identities = 104/139 (75%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| |||||| |||||||||||| |||||||| ||||
Sbjct 2162 CTAGAAACTAATAAAATAGAACTACACGTCTTATTCTATTATTTTATGCTAATATATTTA 2103
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| ||||||||| | | |||| ||||||| | || ||||||||||| ||| |||
Sbjct 2102 AGTATAAGCCTGCCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCTCTAGCA 2043
Query 126 CACCAATGAA--GGCATAC 142
|||| | || |||||||
Sbjct 2042 CACCTAGTAAAGGGCATAC 2024
>seq2346
Length=7286
Score = 89.7 bits (98), Expect = 6e-16
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| |||| || ||||||| | |||||||||||||||||||| || ||||| ||||
Sbjct 2021 CTAAAAACTAATAAAATAGAACCACACGTCCTATTCTATTATTCTATACTAATATATTTA 1962
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | | |||| ||||||| | || ||||||||||| |||| |||
Sbjct 1961 AGTATAGGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCCCTAGCA 1902
Query 126 CACC 129
||||
Sbjct 1901 CACC 1898
>seq3003
Length=5407
Score = 86.0 bits (94), Expect = 7e-15
Identities = 103/139 (74%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| |||||| ||||||||||||| || ||||| ||||
Sbjct 3388 CTAGAAACTAATAAAATAGAACTACACGTCTTATTCTATTATTCTATACTAATATATTTA 3447
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | | |||| ||||||| | || ||||||||||| |||| |||
Sbjct 3448 AGTATAGGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCCCTAGCA 3507
Query 126 CACCAATGAA--GGCATAC 142
|||| | || |||||||
Sbjct 3508 CACCTAGTAAAGGGCATAC 3526
>seq2707
Length=6186
Score = 86.0 bits (94), Expect = 7e-15
Identities = 103/139 (74%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||| |||| ||||||| |||||||| ||||
Sbjct 353 CTAGAAACTAATAAAATAGAACTATACGTCTTATTTTATTATTTTATGCTAATATATTTA 294
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||||| | || |||||||||||| | || ||||||||||| || || |||
Sbjct 293 AGTATAGGCCTGCCTAGAGCACTCTAATTTTTTTAAAGTAAAAGTCCTACTTTCTTAGCA 234
Query 126 CACCAATGAA--GGCATAC 142
||| | || |||||||
Sbjct 233 TACCTAGTAAAGGGCATAC 215
>seq1633
Length=10685
Score = 86.0 bits (94), Expect = 7e-15
Identities = 103/139 (74%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||| || ||||||| ||||||||||||||||||| || ||||| ||||
Sbjct 566 CTAGAAACTAATAAAATAGAACTACACGTCCTATTCTATTATTTTATACTAATATATTTA 625
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | | |||| ||||||| | || ||||||||||| |||| |||
Sbjct 626 AGTATAGGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCCCTAGCA 685
Query 126 CACCAATGAA--GGCATAC 142
|||| | || |||||||
Sbjct 686 CACCTAGTAAAGGGCATAC 704
Score = 77.0 bits (84), Expect = 4e-12
Identities = 102/141 (72%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| |||| || ||||||| |||||| |||||||||||| || ||||| ||||
Sbjct 8688 CTAAAAACTAATAAAATAGAACTACACGTCTTATTCTATTATTTTATACTAATATATTTA 8747
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
| || |||| | | | |||| ||||||| | || ||||||||||| ||| | |||
Sbjct 8748 AGTATAGGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCTTTAGCA 8807
Query 126 CACCAA--TGAAGGCATACGG 144
||| | |||||||||||
Sbjct 8808 CACTTAGTAAAAGGCATACGG 8828
>seq2324
Length=7378
Score = 84.2 bits (92), Expect = 3e-14
Identities = 107/145 (74%), Gaps = 3/145 (2%)
Strand=Plus/Minus
Query 2 GTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTA 61
|||| ||||||| || ||||||| ||||| |||| |||||||| || ||||||||
Sbjct 2140 GTCT-TAGAAACTAATAAAATAGAACTATACGTCTTATTTTATTATTCTATACTAATGTA 2082
Query 62 TTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTC 121
|| | || |||||| | | |||| ||||||| | || |||||||||||| ||||
Sbjct 2081 TTTAAGTATAGGCCTGCCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTGCTTCCCT 2022
Query 122 CGCACACCAA--TGAAGGCATACGG 144
| ||||| | ||||||| |||
Sbjct 2021 AGTACACCTAGTAAAAGGCATGCGG 1997
>seq2313
Length=7424
Score = 84.2 bits (92), Expect = 3e-14
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| |||| || ||||||| |||||||||||||||||||| || ||||| ||||
Sbjct 2190 CTAAAAACTAATAAAATAGAACTACACGTCCTATTCTATTATTCTATACTAATATATTTA 2131
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
| ||||||| | | | |||| ||||||| | || ||||||||||| ||||
Sbjct 2130 AGTATAAGCCTACCTAAAGCACTTTAATTTTTTTAAAGTAAAAGTCCTACTTCC 2077
>seq2191
Length=7884
Score = 84.2 bits (92), Expect = 3e-14
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| |||| |||||||||| ||||||||||||||||||| || ||||| ||||
Sbjct 5733 CTAAAAACTAACAAAATAGAACTACACGTCCTATTCTATTATTTTATACTAATATATTTA 5792
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
| || |||| | | | |||||||||||| | || ||||||||||| ||||
Sbjct 5793 AGTATAGGCCTACCTAAAGCACTCTAATTTTTTTAAAGTAAAAGTCCTACTTCC 5846
>seq1664
Length=10504
Score = 73.4 bits (80), Expect = 5e-11
Identities = 84/113 (74%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| |||| || ||||||| | || ||||||||||||| || ||||| ||||
Sbjct 7639 CTAAAAACTAATAAAATAGAACTATATATCTTATTCTATTATTCTATACTAATATATTTA 7698
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118
| || |||||| | | |||||||||||| | || |||||||||||| |||
Sbjct 7699 AGTATAGGCCTGCCTAAAGCACTCTAATTTTTTTAAAGTAAAAGTCCTGCTTC 7751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595151248470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |