Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1046 78.8 2e-12 >seq1046 Length=15486 Score = 78.8 bits (86), Expect = 2e-12 Identities = 97/133 (73%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 51 AGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACA 110 |||| ||| | ||||| | || || ||| |||||||||| ||||| ||||| | || Sbjct 2966 AGCGCATTTCCGGCCGCTGGGTCCATGAACCCTCGGGCCGTGTGTATAACACCACTTTCA 2907 Query 111 ATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGG 170 | | |||| ||| | |||||||||||||| ||||| || || |||||| || Sbjct 2906 ACGCCCCAATGGTGCCCGGCAAGGACGATGTCACCGGAGAGCCTCTCACGCAGCGCCCGG 2847 Query 171 ACGACACCGAAGA 183 |||||||||| || Sbjct 2846 ACGACACCGAGGA 2834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899123972640