Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017-
01-13] 8,455 sequences; 59,914,086 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2520 434 2e-119
seq2485 235 1e-59
seq3374 226 5e-57
seq2324 217 3e-54
seq1839 217 3e-54
seq2346 208 1e-51
seq3623 203 6e-50
seq2144 203 6e-50
seq2764 199 7e-49
seq2287 194 3e-47
seq2801 190 4e-46
seq2292 185 2e-44
seq1664 185 2e-44
seq3243 183 6e-44
seq2191 181 2e-43
seq1633 176 9e-42
seq2721 172 1e-40
seq2707 172 1e-40
seq2313 167 4e-39
seq3003 158 2e-36
>seq2520
Length=6748
Score = 434 bits (480), Expect = 2e-119
Identities = 283/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| ||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 2088 GAACGAGACCTTGACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 2147
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2148 AGGGACTATCGGCTCAAGCCGATGGAAGTGCGAGGCAATAACAGGTCTGTGATGCCCTTA 2207
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| ||||||||| |||||| ||||| | || |||||||||
Sbjct 2208 GATGTTCTGGGCCGCACGCGCGTTACACTGACGGAGCCAGCGAGTAC-TC-CCTTGGCCG 2265
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2266 GAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2325
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2326 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2385
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 2386 CCCTTTGTA 2394
>seq2485
Length=6841
Score = 235 bits (260), Expect = 1e-59
Identities = 236/304 (78%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| | |||| || | ||| |||||||| |||||
Sbjct 4168 AGACCTTAACCTGCTAAATAGCCTGTATTACTTTAGCAGTACGCTAGCTTCTTAAAGGGA 4109
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| |||||||||||| | || ||||||||| |
Sbjct 4108 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAACAGGTCTATAATACCCTTAGATAT 4049
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||| || |||||| ||||||| | ||| | || |||| || |||||
Sbjct 4048 TCTAGGCTACACGCACGTTACACTAACAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 3991
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| |||| |||||| |||||| ||||||| |||||
Sbjct 3990 CCTAGGTAATCTTATTAAACTCTGTTATGCTAGGGATAAAGCATTATAATTATTACTCTT 3931
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| | ||||||||| || || ||| |||| |||||||||||||| ||
Sbjct 3930 TAATAAGGAATCCTTAGTAAGCGTAAGTTATTAGCTTACGTTAATTACGTCCCTGCCTTT 3871
Query 325 TGTA 328
| ||
Sbjct 3870 TATA 3867
>seq3374
Length=4591
Score = 226 bits (250), Expect = 5e-57
Identities = 234/304 (77%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| | ||||| | | ||| |||||||| |||||
Sbjct 1796 AGACCTTAACCTGCTAAATAGCCTGTATTGCTTTAGTAGTATGCCAGCTTCTTAAAGGGA 1737
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| || ||||||||| |
Sbjct 1736 CTATTAGCTTAAGCTAATAGAAGTATAAGGTAATAATAGGTCTGTAATACCCTTAGATAT 1677
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||| |||||||| |||||| | | ||| | ||| | || |||| || |||||
Sbjct 1676 TCTAGGCCACACGCGCGTTACACTAATAAAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 1619
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| | || ||||| |||||| ||||||| |||||
Sbjct 1618 CCTAGGTAATCTTATTAAACTCTGTTATACTAAGGATAAAGCATTATAATTATTACTCTT 1559
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| ||| ||||||||||| |||||
Sbjct 1558 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCCCTACCCTT 1499
Query 325 TGTA 328
| ||
Sbjct 1498 TATA 1495
>seq2324
Length=7378
Score = 217 bits (240), Expect = 3e-54
Identities = 232/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | | ||| |||||||| |||||
Sbjct 2620 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGTAGTACGCTAGCTTCTTAAAGGGA 2679
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| ||| ||||| | |||| | || ||||||||| |
Sbjct 2680 CTATTAGCTTAAGCTAATAGAAGTGCAAGGTAATAATAAGTCTATAATACCCTTAGATAT 2739
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| |||||||| || ||| | ||||| | ||| | || |||| || |||||
Sbjct 2740 TCTAGGCTACACGCGCGTTATACTAATAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 2797
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||
Sbjct 2798 CCTAGGTAATCTTATTAAACTCTGTCGTGCTAGGGATAAAGCATTATAATTATTGCTCTT 2857
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| ||| |||||||| ||||||||
Sbjct 2858 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCTCTGCCCTT 2917
Query 325 TGTA 328
| ||
Sbjct 2918 TATA 2921
>seq1839
Length=9459
Score = 217 bits (240), Expect = 3e-54
Identities = 232/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | |||||||||| | |||| | | || ||||||||| |||||
Sbjct 4919 AGACCTTAACTTACTAAATAGCCTGTATTACTTTAGTAGTATGCTGGCTTCTTAAAGGGA 4860
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| ||||| |||||| |
Sbjct 4859 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTGTAATGCCTTTAGATAT 4800
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||||||||||||| |||||| || |||| | ||| | || |||| || |||||
Sbjct 4799 TCTAGGCCGCACGCGCGTTACACTAACGGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 4742
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||||||||||||||| ||||| |||||| || ||| ||||||| || ||
Sbjct 4741 CCTAGGTAATCTTGTTAAACTCTGTTGTGCTAGGGATAAAGTATTATAATTATTACTTTT 4682
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| | ||||||| || || ||| ||| |||||||||||||| ||
Sbjct 4681 TAATAAGGAATCCTTAGTAAGTATAAGTTATTAGCTTATGTTAATTACGTCCCTGCCTTT 4622
Query 325 TGTA 328
| ||
Sbjct 4621 TATA 4618
>seq2346
Length=7286
Score = 208 bits (230), Expect = 1e-51
Identities = 230/304 (76%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| | |||| | | | ||||||||||||||
Sbjct 2504 AGACCTTAACCTACTAAATAGCCTGTATTACTTTAGTAGTATACTAGCTTCTTAGAGGGA 2563
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| || || ||||||||
Sbjct 2564 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTGTAATACCTTTAGATGT 2623
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||||||||| || || ||| | ||||| | ||| | || |||| || |||||
Sbjct 2624 TCTAGGCCGCACGCACGTTATACTAATAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 2681
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| ||| |||| |||||| || ||| ||||||| |||||
Sbjct 2682 CCTAGGTAATCTTATTAAACTTTGTTATGCTAGGGATAAAGTATTATAATTATTACTCTT 2741
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||| || || ||| ||| |||||||||||||||||
Sbjct 2742 TAATAAGGAATCCCTAGTAAGTATAAGTTATTAGCTTATGTTAATTACGTCCCTGCCCTT 2801
Query 325 TGTA 328
| ||
Sbjct 2802 TATA 2805
>seq3623
Length=4087
Score = 203 bits (224), Expect = 6e-50
Identities = 229/304 (75%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||| ||||||||| | |||| | | || |||| |||||||||
Sbjct 1453 AGACCTTAACCTGTTAAATAGCCTGTATTACTTTAGTAGTATGCTAGCTTTTTAGAGGGA 1394
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| || |||||||||||
Sbjct 1393 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTGTAATACCCTTAGATGT 1334
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
| | ||||| | ||||| || ||| | | ||| | ||| | || |||| || |||||
Sbjct 1333 TTTAGGCCGTATGCGCGTTATACTAATAAAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 1276
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||||||||||||||| | || |||||| || ||| ||||||| |||||
Sbjct 1275 CCTAGGTAATCTTGTTAAACTCTGTTATACTAGGGATAAAGTATTATAATTATTACTCTT 1216
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| || ||||||||||| |||||
Sbjct 1215 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATATTAATTACGTCCCTACCCTT 1156
Query 325 TGTA 328
| ||
Sbjct 1155 TATA 1152
>seq2144
Length=8075
Score = 203 bits (224), Expect = 6e-50
Identities = 229/304 (75%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | | | ||||||||||||||
Sbjct 2750 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGTAGTATACTAGCTTCTTAGAGGGA 2809
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | | | |||||||||||| | || |||||||||||
Sbjct 2810 CTATTAGCTTAAGCTAATAGAAGTGTAAAGTAATAACAGGTCTATAATACCCTTAGATGT 2869
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| |||| |||| || ||| | ||||| | ||| | || |||| || |||||
Sbjct 2870 TCTAGGCTGCACACGCGTTATACTAATAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 2927
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || |||||| || ||| |||||||||||||
Sbjct 2928 CCTAGGTAATCTTATTAAACTCTATTATACTAGGGATAAAGTATTATAATTATTGCTCTT 2987
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
||| |||||| ||||||||||| || || ||| ||| |||||||| || |||||
Sbjct 2988 TAACAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCTCTACCCTT 3047
Query 325 TGTA 328
| ||
Sbjct 3048 TATA 3051
>seq2764
Length=6024
Score = 199 bits (220), Expect = 7e-49
Identities = 222/294 (76%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| || | ||| ||||||||||||||
Sbjct 2635 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGCAGTACGCTAGCTTCTTAGAGGGA 2694
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || |||||||||||
Sbjct 2695 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTATAATACCCTTAGATGT 2754
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||| || || ||| ||||||| | ||| | || |||| || |||||
Sbjct 2755 TCTAGGCTGCACGTACGTTATACTAACAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 2812
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| || | ||||| |||||| ||||||| || ||
Sbjct 2813 CCTAGGTAATCTTATTAAACTCTGTTATGTTAAGGATAAAGCATTATAATTATTACTTTT 2872
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
|| |||||| ||||||||||| || || ||| || |||||||||||
Sbjct 2873 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATATTAATTACGTCCCT 2926
>seq2287
Length=7528
Score = 194 bits (214), Expect = 3e-47
Identities = 227/304 (75%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||| ||||||| |||||||||| |||| | | ||| ||||||||||||||
Sbjct 2645 AGACTTTAACCTACTAAATAGCCTATATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 2704
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || || |||||| |
Sbjct 2705 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTATAATACCTTTAGATAT 2764
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||||||||||||| |||||| | ||||| | ||| | || |||| || |||||
Sbjct 2765 TCTAGGCCGCACGCGCGTTACACTAATAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 2822
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| |||| |||||| || ||| ||||||| |||||
Sbjct 2823 CCTAGGTAATCTTATTAAACTCTGTTATGCTAGGGATAAAGTATTATAATTATTACTCTT 2882
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| || ||| ||||||||| || || ||| ||| ||||||||| | | |||
Sbjct 2883 TAATAAGAAATCCCTAGTAAGTATAAGTTATTAGCTTATGTTAATTACGTCCTTACTCTT 2942
Query 325 TGTA 328
| ||
Sbjct 2943 TATA 2946
>seq2801
Length=5931
Score = 190 bits (210), Expect = 4e-46
Identities = 225/304 (74%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| | |||| | | | | ||||||||||||||
Sbjct 2815 AGACCTTAACCTACTAAATAGCCTGTATTACTTTAGTAGTACACTAGCTTCTTAGAGGGA 2874
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || |||| | ||| ||||| |||||| | || ||||||||| |
Sbjct 2875 CTATTAGCTTAAGCTAATAAAAGTGTAAGGTAATAATAGGTCTATAATACCCTTAGATAT 2934
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||||||||| || |||||| | | ||| | ||| | | || || |||||
Sbjct 2935 TCTAGGCCGCACGTACGTTACACTAATAAAGCTAGTAAGTACTTTT--TTAGCTAGAAGG 2992
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | |||| |||||| || ||| ||||||| |||||
Sbjct 2993 CCTAGGTAATCTTATTAAACTTTATTATGCTAGGGATAAAGTATTATAATTATTACTCTT 3052
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| |||| ||||||||||| || ||
Sbjct 3053 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTACGTTAATTACGTCCCTACCTTT 3112
Query 325 TGTA 328
| ||
Sbjct 3113 TATA 3116
>seq2292
Length=7519
Score = 185 bits (204), Expect = 2e-44
Identities = 225/304 (74%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| | |||| | | ||| ||||||||||||||
Sbjct 4885 AGACCTTAACCTACTAAATAGCCTGTATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 4826
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| || ||||||||| |
Sbjct 4825 CTATTAGCTTAAGCTAATAGAAGTATAAGGTAATAATAGGTCTGTAATACCCTTAGATAT 4766
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||| | |||||| ||||||| | ||| | || |||| || |||||
Sbjct 4765 TCTAGGCTGCATACATATTACACTAACAGAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 4708
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || ||||| || ||| ||||||| || ||
Sbjct 4707 CCTAGGTAATCTTATTAAACTCTATTATACTAAGGATAAAGTATTATAATTATTACTTTT 4648
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| | ||||||||| || || ||| |||| |||| |||| | |||||
Sbjct 4647 TAATAAGGAATCCTTAGTAAGCGTAAGTTATTAGCTTACGTTAATTATGTCCTTACCCTT 4588
Query 325 TGTA 328
| ||
Sbjct 4587 TATA 4584
>seq1664
Length=10504
Score = 185 bits (204), Expect = 2e-44
Identities = 225/304 (74%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| | |||| | | ||| |||||||||| |||
Sbjct 7156 AGACCTTAACCTACTAAATAGCCTGTATTACTTTAGTAGTACGCTAGCTTCTTAGAAGGA 7097
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| |||||||||||||| || ||||||||| |
Sbjct 7096 CTATTAGCTTAAGCTAATAGAAGTATAAGGTAATAACAGGTCTGTAATACCCTTAGATAT 7037
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||||||||||||| || ||| | | ||| | ||| | || | || || |||||
Sbjct 7036 TCTAGGCCGCACGCGCGTTATACTAATAAAGCTAGTAAGTAC-TC-CTTTAGCTAGAAGG 6979
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | | || ||||| || ||| ||||||| || ||
Sbjct 6978 CCTAGGTAATCTTATTAAACTTTATTATACTAAGGATAAAGTATTATAATTATTACTTTT 6919
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| | |||| ||||||||| || || ||| |||| ||||||||| | |||||
Sbjct 6918 TAATAAAGAATCCCTAGTAAGTATAAGTTATTAGCTTACGTTAATTACGTCCTTACCCTT 6859
Query 325 TGTA 328
| ||
Sbjct 6858 TATA 6855
>seq3243
Length=4847
Score = 183 bits (202), Expect = 6e-44
Identities = 200/263 (76%), Gaps = 2/263 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||| | |||| | | || ||||||||| |||||
Sbjct 4755 AGACCTTAACCTGCTAAATAGCCTGTATTACTTTAGTAGTATGCTGGCTTCTTAAAGGGA 4696
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || || ||||||||
Sbjct 4695 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTATAATACCTTTAGATGT 4636
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||||||||||||| || ||| | ||||| | ||| | || ||| || |||||
Sbjct 4635 TCTAGGCCGCACGCGCGTTATACTAATAGAGCTAGTAAGTAC-TC-TCTTAGCTAGAAGG 4578
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||||| | || ||||| || ||| ||||||| || ||
Sbjct 4577 CCTAGGTAATCTTATTAAACTCTGTTATACTAAGGATAAAGTATTATAATTATTACTTTT 4518
Query 265 CAACGAGGAATGCCTAGTAAGCG 287
|| |||||| | |||||||||
Sbjct 4517 TAATAAGGAATCCTTAGTAAGCG 4495
>seq2191
Length=7884
Score = 181 bits (200), Expect = 2e-43
Identities = 224/304 (74%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | |||||||||| |||| | | ||| ||||||||||||||
Sbjct 5250 AGACCTTAACTTACTAAATAGCCTATATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 5191
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||||| |||||||||||| |
Sbjct 5190 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTGTAATGCCCTTAGATAT 5131
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| |||||| | || ||| | | ||| | ||| | || | || || |||||
Sbjct 5130 TCTAGGCTACACGCGTGTTATACTAATAAAGCTAGTAAGTAC-TC-CTTTAGCTAGAAGG 5073
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| |||||| || ||||||||||| |||| |||||| || ||| ||||||| || ||
Sbjct 5072 CCTAGGTAATTTTATTAAACTCTGTTATGCTAGGGATAAAGTATTATAATTATTACTTTT 5013
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||| || || ||| || |||||||| ||||||||
Sbjct 5012 TAATAAGGAATCCCTAGTAAGTATAAGTTATTAGCTTATATTAATTACGTCTCTGCCCTT 4953
Query 325 TGTA 328
| ||
Sbjct 4952 TATA 4949
>seq1633
Length=10685
Score = 176 bits (194), Expect = 9e-42
Identities = 223/304 (73%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | |||||||||| | |||| | | ||| ||||||||||||||
Sbjct 8205 AGACCTTAACTTACTAAATAGCCTGTATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 8146
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || || |||||| |
Sbjct 8145 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTATAATACCTTTAGATAT 8086
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||||||| |||||| | ||||| | ||| | || || || |||||
Sbjct 8085 TCTAGGCTGCACGCGCGTTACACTAATAGAGCTAGTAAGTAC-TC-TTTTAGCTAGAAGG 8028
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | |||| | |||| || ||| ||||||| || ||
Sbjct 8027 CCTAGGTAATCTTATTAAACTTTATTATGCTAGAGATAAAGTATTATAATTATTACTTTT 7968
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| || ||| | ||||||||| || || ||| ||| ||||||||||| || ||
Sbjct 7967 TAATAAGAAATCCTTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCCCTACCTTT 7908
Query 325 TGTA 328
| ||
Sbjct 7907 TATA 7904
>seq2721
Length=6152
Score = 172 bits (190), Expect = 1e-40
Identities = 222/304 (73%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | | | ||||||||||||||
Sbjct 2796 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGTAGTATACTAGCTTCTTAGAGGGA 2855
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || ||||||||| |
Sbjct 2856 CTATTAGCTTAAGCTAATAGAAGTATAAGGTAATAATAGGTCTATAATACCCTTAGATAT 2915
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| |||||||| ||| |||||| ||||||| | ||| | || ||| || ||||
Sbjct 2916 TCTAGGCCGCACATGCGTTACACTAACAGAGCTAGTAAGTAC-TC-TCTTAGCTAAAAGG 2973
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||||| | | || ||| || ||| ||||||| |||||
Sbjct 2974 CCTAGGTAATCTTATTAAACTCTATTATACTAAAAATAAAGTATTATAATTATTACTCTT 3033
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| |||| |||| ||||| || ||
Sbjct 3034 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTACGTTAATTATATCCCTACCTTT 3093
Query 325 TGTA 328
| ||
Sbjct 3094 TATA 3097
>seq2707
Length=6186
Score = 172 bits (190), Expect = 1e-40
Identities = 222/304 (73%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| || | ||| ||||||||||||||
Sbjct 836 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGCAGTACGCTAGCTTCTTAGAGGGA 895
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| | |||| | || || |||||| |
Sbjct 896 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAAGTCTATAATACCTTTAGATAT 955
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||| |||| |||||| | | ||| | ||| | || |||| || |||||
Sbjct 956 TCTAGGCTACACACGCGTTACACTAATAAAGCTAGTAAGTAC-TC-CCTTAGCTAGAAGG 1013
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| |||||||| ||||||| | | | || ||||| || ||| ||||||| || ||
Sbjct 1014 CCTAAGTAATCTTATTAAACTTTATTATACTAAGGATAAAGTATTATAATTATTACTTTT 1073
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||||| || || ||| ||| ||||||||||| || ||
Sbjct 1074 TAATAAGGAATCCCTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCCCTACCTTT 1133
Query 325 TGTA 328
| ||
Sbjct 1134 TATA 1137
>seq2313
Length=7424
Score = 167 bits (184), Expect = 4e-39
Identities = 221/304 (73%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||||| |||||||||| |||| | | ||| ||||||||||||||
Sbjct 2673 AGACCTTAACCTACTAAATAGCCTATATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 2732
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| |||||||||||||| || | |||||| |
Sbjct 2733 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAACAGGTCTGTAATACTTTTAGATAT 2792
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||||| | |||||| | | ||| | ||| | || |||| || ||| |
Sbjct 2793 TCTAGGCTGCACGCGTGTTACACTAATAAAGCTAGTAAGTAC-TC-CCTTAGCTAGAAAG 2850
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | | || ||||| || ||| ||||||| || ||
Sbjct 2851 CCTAGGTAATCTTATTAAACTTTATTATACTAAGGATAAAGTATTATAATTATTACTTTT 2910
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| |||||| ||||||||| || || ||| || |||||||| || |||||
Sbjct 2911 TAATAAGGAATCCCTAGTAAGTATAAGTTATTAGCTTATATTAATTACGTCTCTACCCTT 2970
Query 325 TGTA 328
| ||
Sbjct 2971 TATA 2974
>seq3003
Length=5407
Score = 158 bits (174), Expect = 2e-36
Identities = 218/304 (72%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
|||||||||| | ||||||||| |||| | | ||| ||||||||||||||
Sbjct 2905 AGACCTTAACTTACTAAATAGCTTATATTACTTTAGTAGTACGCTAGCTTCTTAGAGGGA 2846
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
|||| ||| |||| || ||||| | ||| ||||| |||||| | || || |||||| |
Sbjct 2845 CTATTAGCTTAAGCTAATAGAAGTGTAAGGTAATAATAGGTCTATAATACCTTTAGATAT 2786
Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204
||| ||| ||||| | | || ||| | ||||| | ||| | | || || |||||
Sbjct 2785 TCTAGGCTGCACGTGTGTTATACTAATAGAGCTAGTAAGTACTT--TTTTAGCTAGAAGG 2728
Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264
|| ||||||||| ||||||| | | |||| |||||| || ||| ||||||| || ||
Sbjct 2727 CCTAGGTAATCTTATTAAACTTTATTATGCTAGGGATAAAGTATTATAATTATTACTTTT 2668
Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324
|| | |||| | ||||||||| || || ||| ||| ||||||||| | |||||
Sbjct 2667 TAATAAAGAATCCTTAGTAAGCGTAAGTTATTAGCTTATGTTAATTACGTCCTTACCCTT 2608
Query 325 TGTA 328
| ||
Sbjct 2607 TATA 2604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947119914240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |