Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20graminicola_20[genbank_20GCA_5F001951205.1_202017- 01-13] 8,455 sequences; 59,914,086 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq747 109 2e-18 >seq747 Length=20142 Score = 109 bits (120), Expect = 2e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | || || || |||||||||||| ||||| | Sbjct 6312 CAATGGTCATACGAGACGGAATGGCGTGGGGATTAATAATGATGTCAGGCGTGATGCCCT 6253 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||| ||||||||||| || | || | | | ||||||||| ||||| || | | Sbjct 6252 CGGCGGTGAAGGGCATATCCTCCTGTCGATAGGTAACACCAATGGTACCCTTCTGACCGT 6193 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || || |||||||||||||| Sbjct 6192 GACGCGACGCGAACTTGTCGCCAAT 6168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884682210845315