Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq10183 105 4e-21
seq9206 105 4e-21
seq8999 105 4e-21
seq8496 105 4e-21
seq3602 105 4e-21
>seq10183
Length=1347
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 781 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 725
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 724 GGCAGGGACGTAAT-CAACGCAAGCT 700
>seq9206
Length=1734
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 1591 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1535
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 1534 GGCAGGGACGTAAT-CAACGCAAGCT 1510
>seq8999
Length=1813
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 952 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1008
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 1009 GGCAGGGACGTAAT-CAACGCAAGCT 1033
>seq8496
Length=1992
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 139 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 83
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 82 GGCAGGGACGTAAT-CAACGCAAGCT 58
>seq3602
Length=13378
Score = 105 bits (116), Expect = 4e-21
Identities = 78/86 (91%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 4385 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4329
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 4328 GGCAGGGACGTAAT-CAACGCAAGCT 4304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300771137300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |