Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012-
03-15] 10,235 sequences; 49,084,868 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq6013 122 3e-22
>seq6013
Length=20722
Score = 122 bits (134), Expect = 3e-22
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| ||||||| | |||||||||||||||| || || ||||| |
Sbjct 11057 CAATGGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGATATCTGGTGTGATGCCTT 11116
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| ||||| |||||||| ||||| || || | ||| ||||||||| |||||||| | |
Sbjct 11117 CGGCGGTGAAGGGCATGTCTTCCTGACGATAGGTGACACCAATGGTGCCCTTTTGACCGT 11176
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
|| || ||||||||||| || ||
Sbjct 11177 GACGCGACGCAAACTTGTCACCGAT 11201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884639223654855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |