Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20higginsianum_20[genbank_20GCA_5F000313795.2_202012- 03-15] 10,235 sequences; 49,084,868 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq6013 122 3e-22 >seq6013 Length=20722 Score = 122 bits (134), Expect = 3e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | |||||||||||||||| || || ||||| | Sbjct 11057 CAATGGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGATATCTGGTGTGATGCCTT 11116 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||| |||||||| ||||| || || | ||| ||||||||| |||||||| | | Sbjct 11117 CGGCGGTGAAGGGCATGTCTTCCTGACGATAGGTGACACCAATGGTGCCCTTTTGACCGT 11176 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || ||||||||||| || || Sbjct 11177 GACGCGACGCAAACTTGTCACCGAT 11201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884639223654855