Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04-
19] 2,896 sequences; 53,597,417 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq2672 102 2e-19
>seq2672
Length=21666
Score = 102 bits (112), Expect = 2e-19
Identities = 136/188 (72%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| |||||||| | ||||||| | |||||| || | | ||||||
Sbjct 17221 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 17162
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419
| |||||| |||| | ||| |||| || ||| | | | | | || |||||
Sbjct 17161 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 17102
Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479
|||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| |
Sbjct 17101 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 17042
Query 480 CGGTGAAT 487
||||||||
Sbjct 17041 CGGTGAAT 17034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503956444160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |