Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001625285.1_202016-04-
19] 2,896 sequences; 53,597,417 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2550 358 1e-96
>seq2550
Length=6211
Score = 358 bits (396), Expect = 1e-96
Identities = 237/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2196 TACTCGCTGGCTCCGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2137
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 2136 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 2078
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2077 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2019
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2018 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1959
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1958 AAAGAGCTCTCAATCTGTC 1940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796777645776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |