Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10-
27] 1,036 sequences; 53,254,579 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq1004 80.6 6e-13
>seq1004
Length=3999
Score = 80.6 bits (88), Expect = 6e-13
Identities = 106/146 (73%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| || | ||||||| ||||||||
Sbjct 400 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 341
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 340 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 282
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
|||| ||||||| || || |||| ||
Sbjct 281 GTTAAGGCCGCCATTAACCGGGGGTT 256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062388993536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |