Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10- 27] 1,036 sequences; 53,254,579 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1003 102 2e-19 >seq1003 Length=3944 Score = 102 bits (112), Expect = 2e-19 Identities = 136/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 3296 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 3355 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419 | |||||| |||| | ||| |||| || ||| | | | | | || ||||| Sbjct 3356 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 3415 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 3416 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 3475 Query 480 CGGTGAAT 487 |||||||| Sbjct 3476 CGGTGAAT 3483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503984418560