Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10-
27] 1,036 sequences; 53,254,579 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq1003 102 2e-19
>seq1003
Length=3944
Score = 102 bits (112), Expect = 2e-19
Identities = 136/188 (72%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| |||||||| | ||||||| | |||||| || | | ||||||
Sbjct 3296 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 3355
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419
| |||||| |||| | ||| |||| || ||| | | | | | || |||||
Sbjct 3356 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 3415
Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479
|||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| |
Sbjct 3416 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 3475
Query 480 CGGTGAAT 487
||||||||
Sbjct 3476 CGGTGAAT 3483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503984418560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |