Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10-
27] 1,036 sequences; 53,254,579 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq39 100 1e-15
>seq39
Length=158756
Score = 100 bits (110), Expect = 1e-15
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| || |||| | | || ||||||||||| || ||| ||||| |
Sbjct 50799 CAATGGTCATACGAGACGGGATGGCGTGGGGATTGATGATGATATCCGGCGTGATGCCCT 50858
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| ||||| |||||||||||||| | | | | | ||||||||| ||||| || | |
Sbjct 50859 CGGCGGTGAAGGGCATATCTTCCTGTCGGTAGGTAACACCAATGGTACCCTTCTGACCGT 50918
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
|| || ||||| ||||| |||||
Sbjct 50919 GACGCGACGCAAATTTGTCACCAAT 50943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884861380489148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |