Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20incanum_20[genbank_20GCA_5F001855235.1_202016-10- 27] 1,036 sequences; 53,254,579 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq39 100 1e-15 >seq39 Length=158756 Score = 100 bits (110), Expect = 1e-15 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| || |||| | | || ||||||||||| || ||| ||||| | Sbjct 50799 CAATGGTCATACGAGACGGGATGGCGTGGGGATTGATGATGATATCCGGCGTGATGCCCT 50858 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||| |||||||||||||| | | | | | ||||||||| ||||| || | | Sbjct 50859 CGGCGGTGAAGGGCATATCTTCCTGTCGGTAGGTAACACCAATGGTACCCTTCTGACCGT 50918 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || ||||| ||||| ||||| Sbjct 50919 GACGCGACGCAAATTTGTCACCAAT 50943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884861380489148