Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1236 482 4e-134 seq1304 315 1e-83 seq1278 300 3e-79 seq1302 253 4e-65 seq1268 251 1e-64 seq1299 230 4e-58 seq1274 228 1e-57 seq1315 215 9e-54 seq1262 215 9e-54 seq1273 197 3e-48 seq1263 188 1e-45 seq1250 187 5e-45 seq1325 176 8e-42 >seq1236 Length=11430 Score = 482 bits (534), Expect = 4e-134 Identities = 296/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct 7194 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGCCGGGGA 7135 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 7134 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 7075 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7074 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 7015 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7014 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 6955 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| || Sbjct 6954 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTTATCAG-GA 6896 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 6895 ACGAAAGTTAGGGG 6882 >seq1304 Length=9648 Score = 315 bits (348), Expect = 1e-83 Identities = 259/314 (82%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||| ||| |||||||||| |||| ||| | | || | ||| ||||||| ||| |||| Sbjct 7377 TGGTCTGGCTGGGCCTTTCCCTCTGTGGAACTGTATACTCTTTACTGGGTATGCTAGGGA 7318 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||| |||||||||||||| || | | ||| | | || |||| || Sbjct 7317 AACAGGACTTTTACTTTAAAAAAATTAGAGTGCTCCAGGTAGGTTTATACTTAAATATAT 7258 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||| || |||||||||||||||| ||| ||||||||||||| ||||||||||| || || Sbjct 7257 TAGTATAGAATAATAGAATAGGATGTGTAGTTCTATTTTGTTAGTTTCTAGGACTGCTGT 7198 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||| ||||||||||||||| ||||| | |||||| |||| | ||||||||||||||||| Sbjct 7197 AATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTGAAATTCTTGG 7138 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||| |||||||||||||| ||||| || || ||||||||||| ||| || || || Sbjct 7137 ATTTATTAAAGACTAACTACTGTGAAAGTATTTACTAAGGATGTTTTTATTTATTAG-GA 7079 Query 305 ACGAAAGTTAGGGG 318 | |||| ||||||| Sbjct 7078 ATGAAAATTAGGGG 7065 >seq1278 Length=10311 Score = 300 bits (332), Expect = 3e-79 Identities = 255/313 (81%), Gaps = 1/313 (0%) Strand=Plus/Minus Query 4 TTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 || ||| || |||| ||||| ||| ||| | || || |||||||||| ||| ||| Sbjct 7568 TTAGTCTAGCTGGGCTTTTCCCTCTATGGAACTATATACCTTTCACTGGGTATGCTAGGG 7509 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | ||||||||||||||||||||||||||||| || | | |||| | | |||||||| | Sbjct 7508 AAATAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGTAGGCTTATACTCGAATATA 7449 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||| || ||||||||||||||| || | ||||||||| || |||||||||| |||| Sbjct 7448 TTAGTATAAAATAATAGAATAGGATGTATGATTCTATTTTATTAGTTTCTAGGATTGCCG 7389 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| ||||||||||||||| |||||| | |||||| |||| ||||| ||||||||||| Sbjct 7388 TAATAATTAATAGGGATAGTTGGGGGTATTAGTATTTAATTATCAGAAGTGAAATTCTTA 7329 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 |||||||||||||||||||||| ||||| || || ||||||||||| ||| || || | Sbjct 7328 GATTTATTGAAGACTAACTACTATGAAAGTATTTACTAAGGATGTTTTTATTTATTAG-G 7270 Query 304 AACGAAAGTTAGG 316 || |||||||||| Sbjct 7269 AATGAAAGTTAGG 7257 >seq1302 Length=9750 Score = 253 bits (280), Expect = 4e-65 Identities = 240/305 (79%), Gaps = 1/305 (0%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA 71 || ||| ||||| |||| ||| | | ||| ||| ||||||||||| ||||| |||| Sbjct 2279 GCTGGGTTTTTCCCTCTGTGGAACTGTATGTTCTTTACTGGGTGTGCTGGGGAAATAGGA 2338 Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 ||||| ||||||||||||||| || | | | ||| | | | ||||| ||||| ||| Sbjct 2339 TTTTTATTTTGAAAAAATTAGAATGCTTTAGGTAGGTTTATATTTGAATATATTAGTATG 2398 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||| | ||| ||||||||||||||||||| ||||| || ||||||||| Sbjct 2399 GAATAATAGAATAGAATGTGTGGTTCTATTTTGTTGGTTTTTAGGATTGCTGTAATGATT 2458 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||||||| | ||| | |||||| |||| ||||| |||||||| || |||||||| Sbjct 2459 AATAGGGATAGTTAGAGGTATTAGTATTTAATTATCAGAAGTGAAATTTTTAGATTTATT 2518 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||| ||| || | ||||| || | ||||||||||| ||| || || ||| |||| Sbjct 2519 AAAGATTAATTATTATGAAAGTATTTGCTAAGGATGTTTTTATTTATTAG-GAATAAAAG 2577 Query 312 TTAGG 316 ||||| Sbjct 2578 TTAGG 2582 >seq1268 Length=10630 Score = 251 bits (278), Expect = 1e-64 Identities = 237/301 (79%), Gaps = 1/301 (0%) Strand=Plus/Plus Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||| ||||| |||| ||| | | || | |||||| || | | || || |||||||| Sbjct 2724 GGCTTTTCCCTCTGTGGAACTGTATACTTTTCACTAAGTATACTGGAGAAATAGGACTTT 2783 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 || ||||||||||||||| || || | | || ||| | || |||| ||||| || ||| Sbjct 2784 TATTTTGAAAAAATTAGAATGCTCTAGGTAGACCTATACTTAAATATATTAGTATAAAAT 2843 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||||||||||| || | || |||||| || ||||||||||||| |||| ||||||| Sbjct 2844 AATAGAATAGGATGTATGATTTTATTTTATTAGTTTCTAGGACCGTTATAATAATTAATA 2903 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||| |||||| ||| | |||||| |||| ||||||||||||||||| |||||||||||| Sbjct 2904 GGGACAGTCGGAGGTATTAGTATTTAATTATCAGAGGTGAAATTCTTAGATTTATTGAAG 2963 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 |||||||||| |||| || || |||||| |||| ||| || || ||| ||||||||| Sbjct 2964 ACTAACTACTATAAAAGTATTTACTAAGGATATTTTTATTTATTAG-GAATGAAAGTTAG 3022 Query 316 G 316 | Sbjct 3023 G 3023 >seq1299 Length=9828 Score = 230 bits (254), Expect = 4e-58 Identities = 239/312 (77%), Gaps = 1/312 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| ||| ||||| |||| || | || || || | | ||||| |||| Sbjct 2599 TGGTCCGGCTAGGCTTTTCCCTCTGTAGAACTATATACCTTTTATTAGGTGTATTAGGGA 2658 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||| ||||||||||| | || | | || | | || |||| || Sbjct 2659 AACAGGACTTTTACTTTAAAAAAATTAGAATACTCCAGATAAGCTTATACTTAAATATAT 2718 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||| || |||||||||||||||| | |||||||||| || |||||||||||| | | Sbjct 2719 TAGTATAGAATAATAGAATAGGATATATAGTTCTATTTTATTAGTTTCTAGGACCACTAT 2778 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||| ||||||||||||||| || || | |||||| |||| | ||| |||||||| || | Sbjct 2779 AATAATTAATAGGGATAGTTAGGAGTATTAGTATTTAATTATTAGAAGTGAAATTTTTAG 2838 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||| || ||||| |||| |||||| || || ||||||||||| ||| || || || Sbjct 2839 ATTTATTAAAAACTAATTACTACGAAAGTATTTACTAAGGATGTTTTTATTTATTAG-GA 2897 Query 305 ACGAAAGTTAGG 316 | |||||||||| Sbjct 2898 ATGAAAGTTAGG 2909 >seq1274 Length=10448 Score = 228 bits (252), Expect = 1e-57 Identities = 239/313 (76%), Gaps = 1/313 (0%) Strand=Plus/Plus Query 4 TTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 || |||| || || ||||||| ||| ||| | || | ||||| | || | |||| Sbjct 2744 TTAGTCCAGCTGGACCTTTCCCTCTATGGAACTATATACTCTTCATTAAGTATACCGGAA 2803 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | ||||||||||||||| ||||||||||| || || | ||| | | | || |||| | Sbjct 2804 AAACAGGACTTTTACTTTAAAAAAATTAGAATGCTCCAGACAGACTTATACTTAAATATA 2863 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 ||| || |||||||||||||||| | ||||||||| || ||||||||||| Sbjct 2864 TTAATATAGAATAATAGAATAGGATATATAATTCTATTTTATTAGTTTCTAGGACTATTA 2923 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| ||||||||||| |||||| || | |||||| |||| | |||||||||||| ||| Sbjct 2924 TAATAATTAATAGGGACAGTCGGAAGTATTAGTATTTAATTATTAGAGGTGAAATTTTTG 2983 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 |||||||||||||||||||| | ||||| || || || ||| |||| ||| || || | Sbjct 2984 GATTTATTGAAGACTAACTATTATGAAAGTATTTACTAAAGATATTTTTATTTATTAG-G 3042 Query 304 AACGAAAGTTAGG 316 ||||||||||||| Sbjct 3043 AACGAAAGTTAGG 3055 >seq1315 Length=9210 Score = 215 bits (238), Expect = 9e-54 Identities = 234/309 (76%), Gaps = 1/309 (0%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 |||| || ||| |||| |||| ||| | |||||||||||| | | | | || Sbjct 6294 GTCCAGCTAGGCTTTTCTCTCTGTGGAACTATATGCCCTTCACTAGATATACTAAAGAAA 6235 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 || |||||||||||| ||||||||||| || || | | | |||| | || |||| |||| Sbjct 6234 CAAGACTTTTACTTTAAAAAAATTAGAATGCTCCAGGTAAGCCTATACTTAAATATATTA 6175 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 | || |||||||||||||| | | ||||||||| || |||||||||| | ||| Sbjct 6174 GTATAGAATAATAGAATAGAATATATAATTCTATTTTATTAGTTTCTAGGATTACTATAA 6115 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 | ||||||||||| ||| || || |||||||| |||| | ||| ||||||||||| ||| Sbjct 6114 TAATTAATAGGGACAGTTAGGAGTATCAGTATTTAATTATTAGAAGTGAAATTCTTAGAT 6055 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||||||||||||||||||| |||| || || || || |||| ||| || || ||| Sbjct 6054 TTATTGAAGACTAACTACTGCAAAAGTATTTACTAAAAATATTTTTATTTATTAG-GAAT 5996 Query 307 GAAAGTTAG 315 |||||||| Sbjct 5995 AAAAGTTAG 5987 >seq1262 Length=10766 Score = 215 bits (238), Expect = 9e-54 Identities = 228/299 (76%), Gaps = 1/299 (0%) Strand=Plus/Minus Query 18 CCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTA 77 ||||||| ||| || | || ||||||||| || | || | | ||| ||||||| Sbjct 8255 CCTTTCCCTCTATAGAACTATATACCCTTCACTAAGTATACCAAGAAAACAGAACTTTTA 8196 Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137 |||| ||||||||||| | || |||||||||| | || |||||||||| || |||||| Sbjct 8195 CTTTAAAAAAATTAGAATACTCCAAGCAGGCCTATACTTAAATACATTAGTATAGAATAA 8136 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 ||||||| || | ||||||||| || |||||||||||| | |||| ||||||||| Sbjct 8135 TAGAATAAGATATATAATTCTATTTTATTAGTTTCTAGGACCACTATAATAATTAATAGG 8076 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||| | | | |||||||| |||| ||||| ||||||||||| |||||||| || || Sbjct 8075 GATAATTAGAAATATCAGTATTTAATTATCAGAAGTGAAATTCTTAGATTTATTAAAAAC 8016 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 ||||| || |||| || || |||||| |||| ||| || || ||||||| ||||| Sbjct 8015 TAACTGCTATAAAAGTATTTACTAAGGATATTTTTATTTATTAG-AAACGAAAATTAGG 7958 >seq1273 Length=10531 Score = 197 bits (218), Expect = 3e-48 Identities = 230/309 (74%), Gaps = 1/309 (0%) Strand=Plus/Minus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCC 67 ||| || |||||||||| ||| ||| | || | |||||||||| | | || || Sbjct 7898 TCCAGCTGGGCCTTTCCCTCTATGGAACTATATACTTTTCACTGGGTATACTGGAGAAAT 7839 Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127 |||| ||||||||| ||||||||||| || || | | | || | | | |||| ||||| Sbjct 7838 AGGATTTTTACTTTAAAAAAATTAGAATGCTCCAGGTAAGCTTATATTTAAATAAATTAG 7779 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 || |||||||| ||||||| | | ||| |||||| || |||||||||||| | |||| Sbjct 7778 TATAGAATAATAAAATAGGATATACAGTTTTATTTTATTAGTTTCTAGGACCACTATAAT 7719 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 | ||||||||| ||| || | | |||||| |||| | ||| ||||||||||| |||| Sbjct 7718 AAATAATAGGGACAGTTAGGAATATTAGTATTTAATTATGAGAAGTGAAATTCTTAGATT 7659 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||| || |||||||| | |||| || || |||||| |||| ||| || || ||| Sbjct 7658 TATTAAAAACTAACTATTATAAAAGTATTTACTAAGGATATTTTTATTTATTAG-GAATA 7600 Query 308 AAAGTTAGG 316 ||| ||||| Sbjct 7599 AAAATTAGG 7591 >seq1263 Length=10760 Score = 188 bits (208), Expect = 1e-45 Identities = 222/299 (74%), Gaps = 1/299 (0%) Strand=Plus/Plus Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76 || |||||||||| ||| | || | ||||||| | | | ||||| || | |||| Sbjct 2601 GCTTTTCCTTCTGTGGAACTATATACTCTTCACTAAATATACTGGGGAAATAGAATTTTT 2660 Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 ||||| |||| |||||| | || | | || | | | | |||| ||||| || ||||| Sbjct 2661 ACTTTAAAAAGATTAGAATATTTTAGGTAGACTTATATTTAAATATATTAGTATAGAATA 2720 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 ||| ||||||| | |||||||||| || |||||||||| | |||| |||||||| Sbjct 2721 ATAAAATAGGATATATAGTTCTATTTTATTAGTTTCTAGGATTGTTATAATAATTAATAG 2780 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 ||||||| || || | |||||| |||| | ||| ||||||||||| |||||||| || | Sbjct 2781 GGATAGTTAGGAGTATTAGTATTTAATTATTAGAAGTGAAATTCTTAGATTTATTAAAAA 2840 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||||||||| |||| || || || ||| |||| ||| || || |||||||||||| Sbjct 2841 CTAACTACTATAAAAGTATTTACTAAAGATATTTTTATTTATTAG-AAACGAAAGTTAG 2898 >seq1250 Length=11053 Score = 187 bits (206), Expect = 5e-45 Identities = 222/300 (74%), Gaps = 1/300 (0%) Strand=Plus/Plus Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76 || ||||| ||| || | ||| ||||||||| | | | || | || ||| |||||| Sbjct 2683 GCTTTTCCCTCTATAGAACTACATACCCTTCACTAGATATACCAGAGAAACAGAACTTTT 2742 Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 ||||| ||||||||| | | || | | ||| | ||| |||| |||| ||| |||| Sbjct 2743 ACTTTAAAAAAATTAAAATACTCCAGATAAACCTATACTCAAATATATTAACATAAAATA 2802 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 ||| |||| || | ||||||||| || |||||||| ||| | |||| |||||||| Sbjct 2803 ATAAAATAAGATATATAATTCTATTTTATTAGTTTCTAGAACCACTATAATAATTAATAG 2862 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 || |||| || || |||||||| |||| ||||| | |||||||| ||||||| || | Sbjct 2863 AGACAGTCAGGAGTATCAGTATTTAATTATCAGAAATAAAATTCTTAAATTTATTAAAAA 2922 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 ||||||||| |||||| || ||||| || |||||||| ||||| ||| | | ||||| Sbjct 2923 CTAACTACTACGAAAGTATTTACCAAAAATATTTTCATTTATCAG-AAACAACAATTAGG 2981 >seq1325 Length=9050 Score = 176 bits (194), Expect = 8e-42 Identities = 219/299 (73%), Gaps = 1/299 (0%) Strand=Plus/Minus Query 18 CCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTA 77 ||||||| ||| || | || | ||||||| ||| | | | ||| |||||||||| Sbjct 6226 CCTTTCCCTCTATAGAACTATATACTCTTCACTAGGTATACTGAGGAAATAGGACTTTTA 6167 Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137 ||| ||||||||||| | | | | | || | | || |||| |||| || |||||| Sbjct 6166 TTTTAAAAAAATTAGAATACTTCAGGTAAGCTTATACTTAAATATATTAATATAGAATAA 6107 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 |||||||| | | ||||||||| || |||||||||| | |||| ||||||||| Sbjct 6106 TAGAATAGAATATATAATTCTATTTTATTAGTTTCTAGGATCATTATAATAATTAATAGG 6047 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||| || || | |||||| |||||| ||||||||||||||| |||||||| || || Sbjct 6046 GATAGTTGGAAGTATTAGTATTTAATTGTTAGAGGTGAAATTCTTAGATTTATTAAAAAC 5987 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316 |||||| | ||| || | |||||| |||| ||| || || ||| ||| ||||| Sbjct 5986 TAACTATTATAAAAATATTTATTAAGGATATTTTTATTTATTAG-GAATAAAAATTAGG 5929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915183004736