Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1236 360 3e-97 seq1304 228 1e-57 seq1278 210 4e-52 seq1268 183 5e-44 seq1315 179 6e-43 seq1263 163 5e-38 seq1262 156 7e-36 seq1299 147 4e-33 seq1274 147 4e-33 seq1273 141 2e-31 seq1250 138 2e-30 seq1325 120 5e-25 seq1302 118 2e-24 seq58 114 2e-23 >seq1236 Length=11430 Score = 360 bits (398), Expect = 3e-97 Identities = 202/204 (99%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1329 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 1388 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1389 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 1448 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1449 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 1508 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 1509 CACACTTTCATGGTTTGTATTCAC 1532 Score = 136 bits (150), Expect = 7e-30 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 774 TACTAAGCTCAATTACCATTGCGACGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 832 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 833 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 864 >seq1304 Length=9648 Score = 228 bits (252), Expect = 1e-57 Identities = 173/204 (85%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| |||||| |||| ||| |||||| ||||||||||| |||| ||||||| |||| || Sbjct 1512 TAGTAGGTGAATAATCTAACACTTACCAAATTCTGCTTCAGTATAATAGGAAAAGCCAAC 1571 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| |||||||||||||| || || |||| ||| ||| || |||||||| ||||||||| Sbjct 1572 ATCAAAGGATCAAAAAGCGACATCACTATAAACACTTAGCCGCCACAAGTTAGTTATCCC 1631 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| ||||||||||| ||||||||||||| |||||| |||| |||||| Sbjct 1632 TATAGTAACTTTTCTAGCACCTCTAGCTTCAAATTTCGAGGAACTAAAAGATCAATAGGC 1691 Query 272 CACACTTTCATGGTTTGTATTCAC 295 ||| ||| || |||| ||||||| Sbjct 1692 TACATTTTTATAGTTTATATTCAC 1715 Score = 113 bits (124), Expect = 8e-23 Identities = 81/92 (88%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| | ||||||||||| | ||| | |||||||||||||||||||||||| ||||| Sbjct 957 TACTAAACTCAATTACCATTGCGACGAAG-TCATCAGTAGGGTAAAACTAACCTATCTCA 1015 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||| ||||||||||||||||| ||||||||| Sbjct 1016 CGACAGTCTAAACCCAGCTCACATTCCCTATT 1047 >seq1278 Length=10311 Score = 210 bits (232), Expect = 4e-52 Identities = 169/204 (83%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || ||||||| ||| ||||| |||||| |||| |||| ||| ||| ||| | Sbjct 1702 TAGTAAGTAAACAATCTAACACTTACTAAATTCTACTTCAGTATAATAAGAAAAGCTAAT 1761 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||| |||||||||| |||||||||| || ||| |||||||||||| ||||||||| Sbjct 1762 ATTAAAGAATCAAAAAGCGACGTCGCTATAAATACTTAGCTGCCACAAGCTAGTTATCCC 1821 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| |||||||||||||||||||||||| ||||||| ||| |||||| Sbjct 1822 TATAGTAACTTTTCTAGCACCTCTAGCCTCAAATTTCGAGAGACTAAAAAATCAATAGGC 1881 Query 272 CACACTTTCATGGTTTGTATTCAC 295 ||||||| || |||| ||||||| Sbjct 1882 TACACTTTTATAGTTTATATTCAC 1905 >seq1268 Length=10630 Score = 183 bits (202), Expect = 5e-44 Identities = 163/204 (80%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || || |||| ||||||||||||||||| ||| |||| ||||||||||| ||| Sbjct 8578 TAGTAAGTAAATAATCTAACGCTTACCGAATTCTACTTTAGTATAATAGGAAGAGCTGAC 8519 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || || ||||||||||| ||||| ||| ||| ||| || ||||||||| ||||||||| Sbjct 8518 ATTAAAAGATCAAAAAGCGACGTCATTATAAACACTTAGCCGCCACAAGCTAGTTATCCC 8459 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| | | ||||| | | |||||| ||| ||||||||||| ||| | Sbjct 8458 TATAGTAACTTTTCTAGTATCTCTAACTTTAAATTTTGAGAAACTAAAGGATCAATAAGT 8399 Query 272 CACACTTTCATGGTTTGTATTCAC 295 | | ||| || |||| ||||||| Sbjct 8398 TATATTTTTATAGTTTATATTCAC 8375 Score = 73.4 bits (80), Expect = 7e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||| ||| | || ||||||||||| || ||||| |||||| Sbjct 9102 ATCAGTAGGGTAAAACTAACCTATCTTACAACAGTCTAAACCCAACTTACGTTTCCTATT 9043 >seq1315 Length=9210 Score = 179 bits (198), Expect = 6e-43 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| ||| || |||| || |||||| ||||||| |||| |||| ||| ||||||| | Sbjct 431 TAGTAGGTAAATAATCTAATGCTTACTGAATTCTACTTCAGTATAATAAGAAGAGCTAAT 490 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || || ||| |||||| |||| |||| ||| || || ||||||||| ||||||||| Sbjct 491 ATTAAAAGATTAAAAAGTGACGTTACTATAAACATTTAGCCGCCACAAGCTAGTTATCCC 550 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| | ||||||||| | |||||| ||||||||||| ||| ||| || Sbjct 551 TATAGTAACTTTTCTAGTACCTCTAGCTTTAAATTTTGAGGGACTAAAAGATTAATAAGC 610 Query 272 CACACTTTCATGGTTTGTATTCAC 295 ||||||| || |||| ||||||| Sbjct 611 TACACTTTTATAGTTTATATTCAC 634 >seq1263 Length=10760 Score = 163 bits (180), Expect = 5e-38 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||||||||| |||| || ||||| |||||| ||| |||| ||||||| ||| | Sbjct 8453 TAGTGGGTGAATAATCTAATACTTACTAAATTCTACTTTAGTATAATAGGAAAAGCTAAT 8394 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||| ||| |||||| | | |||| || ||| ||| | | |||| ||||||||| Sbjct 8393 ATTGAAAGATTAAAAAGTGATATTACTATAAATACTTAGCTACTATAAGCTAGTTATCCC 8334 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||||| || |||||| | |||||||||||||||||| ||| |||||| Sbjct 8333 TATAGTAACTTTTCTGGTACTTCTAGCTTTAAATTTCGAGGGACTAAAAGATTAATAGGC 8274 Query 272 CACACTTTCATGGTTTGTATTCA 294 ||| ||| || |||| |||||| Sbjct 8273 TACATTTTTATAGTTTATATTCA 8251 Score = 82.4 bits (90), Expect = 1e-13 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | | ||| ||||||| ||||||||||| |||||||| Sbjct 9008 TACTAAGCTTAATTACTATTACGATAA-GGTTATCAGTAAGGTAAAACTAATCTGTCTCA 8950 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || || |||||| |||| |||||||||||| Sbjct 8949 CGATAGTTTAAACCTAGCTTACGTTCCCTATT 8918 >seq1262 Length=10766 Score = 156 bits (172), Expect = 7e-36 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||| || |||| ||||||||| ||||| | || |||| ||||||| || | Sbjct 2403 TAGTGGGTAAATAATCTAACGCTTACTGAATTTTATTTTAGTATAATAGGAAAAGTTAAT 2462 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||| |||||| | || |||| || |||| | | | | ||| ||||||| | Sbjct 2463 ATTAAAGGATTAAAAAGTGATGTTACTATAAATGCTTAGTTACTATAAGTTAGTTATCTC 2522 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| ||| |||| | | |||||||||||||||||| ||||||||||| Sbjct 2523 TATAGTAACTTTTCTAGCATTTCTAACTTTAAATTTCGAGGGACTAAAAGATCGATAGGC 2582 Query 272 CACACTTTCATGGTTTGTATTCAC 295 ||| ||| || |||| ||||||| Sbjct 2583 TACATTTTTATAGTTTATATTCAC 2606 Score = 73.4 bits (80), Expect = 7e-11 Identities = 72/92 (78%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | ||| ||| || ||||||||||||| ||||||||||| Sbjct 1848 TACTAAGCTTAATTACTATTACGACGA-GGTTATTAGTAGGGTAAAACCAACCTGTCTCA 1906 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 | | ||||||| |||| | || |||||| Sbjct 1907 TAATAATCTAAACTTAGCTTATATTTCCTATT 1938 >seq1299 Length=9828 Score = 147 bits (162), Expect = 4e-33 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| ||| || |||| |||| |||| |||||| |||| |||| ||| ||| | | | Sbjct 8464 TAGTAGGTAAATAATCTAACGTTTACTAAATTCTACTTCAGTATAATAAGAAAAACTAAT 8405 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || || || |||||| ||||| |||| || ||| ||| | | |||| ||||||||| Sbjct 8404 ATTAAAAAATTAAAAAGTAACGTTACTATAAATACTTAGCTACTATAAGCTAGTTATCCC 8345 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| | ||||||| | | |||||||||| ||||||| ||||||||||| Sbjct 8344 TATAGTAACTTTTCTAGTACCTCTAACTTTAAATTTCGAGAGACTAAAAGATCGATAGGC 8285 Query 272 CACACTTTCATGGTTTGTATT 292 | | ||| || ||| |||| Sbjct 8284 TATATTTTTATAATTTATATT 8264 >seq1274 Length=10448 Score = 147 bits (162), Expect = 4e-33 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || || |||| || ||||| |||| | ||| |||| ||||||| ||| | Sbjct 8610 TAGTAAGTAAATAATCTAATACTTACTAAATTTTATTTCAGTATAATAGGAAAAGCTAAT 8551 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| || |||||||| || | |||| ||| ||| ||| | | |||| |||||| || Sbjct 8550 ATCAAAAAATCAAAAAATGACATTACTATAAACACTTAGCTACTATAAGCTAGTTATTCC 8491 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| ||| ||||||| |||||||||||||||||||| ||| |||||| Sbjct 8490 TATAGTAACTTTTCTAGCATCTCTAGCTTCAAATTTCGAGGGACTAAAAGATTAATAGGC 8431 Query 272 CACACTTTCATGGTTTGTATTCAC 295 ||| ||| || |||| |||| || Sbjct 8430 TACATTTTTATAGTTTATATTTAC 8407 >seq1273 Length=10531 Score = 141 bits (156), Expect = 2e-31 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || || |||| ||| |||||| |||||| |||| |||| ||| ||||||| | Sbjct 2036 TAGTAAGTAAATAATCTAACACTTACCAAATTCTACTTCAGTATAATAAGAAGAGCTAAT 2095 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| || ||| ||||| | ||||| |||| ||| ||| ||| | | || | ||| ||||| Sbjct 2096 ATCAAAAGATTAAAAAACGACGTCACTATAAACACTTAGCTACTATAAACTAGTCATCCC 2155 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| |||| |||| ||| |||||| || | |||||| ||| ||| | Sbjct 2156 TATAGTAACTTTTCTAGCACTTCTAACCTTAAATTTTGAAGAACTAAAAGATTAATAAGT 2215 Query 272 CACACTTTCATGGTTTGTATTCA 294 | | ||| || ||| |||||| Sbjct 2216 TATATTTTTATAATTTATATTCA 2238 Score = 77.0 bits (84), Expect = 6e-12 Identities = 73/92 (79%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||| | ||| || |||||| |||||||||||| ||||| Sbjct 1481 TACTAAGCTCAATTACCATTATAATAA-GGTTATTAGTAGGATAAAACTAACCTATCTCA 1539 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 | | ||||||| | | ||||||||||||||| Sbjct 1540 TAATAGTCTAAATCTAACTCACGTTCCCTATT 1571 >seq1250 Length=11053 Score = 138 bits (152), Expect = 2e-30 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || || ||| || |||||| |||||| ||| |||| ||| || ||| | Sbjct 8536 TAGTAAGTAAATAATTTAATACTTACCAAATTCTACTTTAGTATAATAAAAAAAGCTAAT 8477 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||| || |||||||||||| |||| || ||| | | | | |||| |||||||| Sbjct 8476 ATTAAAGAATTAAAAAGCAACGTTACTATAAATACTTAGTTACTATAAGCTAGTTATCCT 8417 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | |||| |||||| | | ||||||| | |||||||||||||||||||||| |||||| Sbjct 8416 TATAGTAATTTTTCTAGTATCTCTAGCTTTAAATTTCGAGGGACTAAAGGATTAATAGGC 8357 Query 272 CACACTTTCATGGTTTGTATT 292 ||| ||| || |||| |||| Sbjct 8356 TACATTTTTATAGTTTATATT 8336 Score = 73.4 bits (80), Expect = 7e-11 Identities = 72/92 (78%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| ||| | | ||| || |||||||||||||||| || ||||| Sbjct 9091 TACTAAGCTTAATTACTATTACGATAA-GGTTATTAGTAGGGTAAAACTAATCTATCTCA 9033 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||| |||| |||||||||||| Sbjct 9032 CGATAGTCTAAATTTAGCTTACGTTCCCTATT 9001 >seq1325 Length=9050 Score = 120 bits (132), Expect = 5e-25 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| ||| || |||| ||| ||||| |||||| |||| |||| ||||||| | | | Sbjct 374 TAGTAGGTAAATAATCTAACACTTACTAAATTCTACTTCAGTATAATAGGAAAAACTAAT 433 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| || || ||||| || | |||| || ||| ||| | | || |||||||| Sbjct 434 ATCAAAAAATTAAAAAATAATATTACTATAAATACTTAGCTACTATAAATTAGTTATCCT 493 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| | |||||||| | |||||| ||||||||||| ||| ||| | Sbjct 494 TATAGTAACTTTTCTAGTACCTCTAGTTTTAAATTTTGAGGGACTAAAAGATTAATAAGT 553 Query 272 CACACTTTCATGGTTTGTATTCAC 295 | | ||| || |||| ||||||| Sbjct 554 TATATTTTTATAGTTTATATTCAC 577 >seq1302 Length=9750 Score = 118 bits (130), Expect = 2e-24 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||| || || |||| || ||||| |||||| |||| |||| ||||||| | | Sbjct 8135 TAGTAAGTAAATAATCTAATACTTACTAAATTCTACTTCAGTATAATAGGAAAAATTAAT 8076 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||||||||||||| || | |||| || ||| ||| | | |||| | ||||||| Sbjct 8075 ATTAAAGGATCAAAAAGTAATATTACTATAAATACTTAGCTACTATAAGCTAATTATCCC 8016 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | | ||||||||||| | | ||||| | | |||||||||| ||||||| || ||| || Sbjct 8015 TATAGTAACTTTTCTAGTATCTCTAACTTTAAATTTCGAGAGACTAAAAAATTAATAAGC 7956 Query 272 CACACTTTCATGGTTTGTATTCAC 295 | |||| || |||| |||| || Sbjct 7955 TATACTT--ATAGTTTATATTTAC 7934 >seq58 Length=230734 Score = 114 bits (126), Expect = 2e-23 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||| || ||| || ||||| |||||| ||| |||| ||||||| | | | || | Sbjct 13881 GGTAAATAATTTAATACTTACTAAATTCTATTTCAGTATAATAGGAAAAACTAATATTAA 13822 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 | ||| |||||| || | |||| || ||| ||| | | |||| |||||||||| | | Sbjct 13821 AAGATTAAAAAGTAATATTACTATAAATACTTAGCTACTATAAGCTAGTTATCCCTATAG 13762 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 |||||||||||| || |||| | | |||||| |||||||||| || ||| | ||| Sbjct 13761 TAACTTTTCTGGTACTTCTAACTTTAAATTTTAAGGGACTAAAAAATTAATAAGTTACAT 13702 Query 277 TTTCATGGTTTGTATTCA 294 ||| || |||| |||||| Sbjct 13701 TTTTATAGTTTATATTCA 13684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854384133792