Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1236 100 2e-19 >seq1236 Length=11430 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 5502 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 5558 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 5559 GGCAGGGACGTAAT-CAACGCAAGCT 5583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300794763260