Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201 7-02-04] 1,857 sequences; 97,411,422 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1236 367 4e-99 seq1278 197 5e-48 seq58 183 1e-43 seq1304 181 3e-43 seq1273 174 5e-41 seq1268 163 9e-38 seq1274 156 1e-35 seq1263 143 9e-32 seq1250 143 9e-32 seq1315 134 5e-29 seq1299 125 2e-26 seq1262 125 2e-26 seq1325 122 3e-25 seq74 87.8 6e-15 seq1302 86.0 2e-14 >seq1236 Length=11430 Score = 367 bits (406), Expect = 4e-99 Identities = 257/291 (88%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1564 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1623 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1624 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1683 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 1684 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTCATTGA 1741 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 1742 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1798 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 1799 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 1849 Score = 251 bits (278), Expect = 2e-64 Identities = 142/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2198 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 2257 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2258 TAGTAGATAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGA 2317 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||| Sbjct 2318 CGAGGCATTTGGCTACCTTAAGAG 2341 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2676 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 2735 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2736 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2778 >seq1278 Length=10311 Score = 197 bits (218), Expect = 5e-48 Identities = 220/291 (76%), Gaps = 7/291 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||||| ||||| || ||||||||||||||||||| |||||| | Sbjct 1938 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGTCCCCCTTAGGACACCTACGTTATAG 1997 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| ||| ||| | | ||||||||||||||| ||| | |||||| | | Sbjct 1998 TTTAACAGATATGCTACCCTAACTAAACTCCCCACCTGATAATATTTTCAACCTAAGTTG 2057 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 ||| || || |||||||| | |||| | | | | || |||| ||| ||| ||| | Sbjct 2058 GCCTGCAAAAGACCTTAAAACTAGAA---GTTAGATATAAATCCAGCTCCACTTTATTAA 2114 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||| | |||||||||| || ||||| ||| ||||||| Sbjct 2115 ATAAGTAAAAAAACAATAGGAGTAATAGTATTTCACTAGCACCGAA---GCTTCCACTTA 2171 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||| |||| | | ||||| || || |||| ||| ||||||||| Sbjct 2172 TTCTATACCTTCTATATTTTTTCATAATGTTAAACTAAAGTTAAGCTCAAC 2222 Score = 116 bits (128), Expect = 1e-23 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||||||| || |||| | || || |||| || || | ||||||||||||||| Sbjct 2575 TCTTCTTTCCCCACTAATTCTACTAAACCTATTCCTTTAACTATAGTTTCGCTAGATAGT 2634 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 | |||| |||||| ||||||||||||| ||| || | | ||||||||||| || || Sbjct 2635 AAATAGAGACAGTAAGAATCTCGTTAATTTATTTATACATATTACTAATTAGATAACAAG 2694 Query 422 GCATTTGGCTACCTTAAGA 440 | |||| ||||||||||| Sbjct 2695 GTATTTAACTACCTTAAGA 2713 Score = 98.7 bits (108), Expect = 3e-18 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 |||||||||||| | ||||||| ||||| || |||| ||||||||| ||||||||||| Sbjct 3054 ATAGTTACTCCCACTATTTACCCACGCTTAATTAAATTACTTCACTTTAACATTCAGAGC 3113 Query 506 ACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 | | ||||||||||| ||| | | || | |||||||| Sbjct 3114 ATTAGGCAGAAATCATATTACATTAATACCACTTTCT 3150 >seq58 Length=230734 Score = 183 bits (202), Expect = 1e-43 Identities = 303/435 (70%), Gaps = 7/435 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||||| ||||| || || |||||||||| | || |||| | Sbjct 13650 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGCTCCCCTTAGGATATCTATATTATAG 13591 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | || | | ||| ||||||||||| | | ||| || | |||| | Sbjct 13590 TTTAATAGATATACCACTCTAGCTAAACTCCCCACTTAATAATATCTTTAACCTAAGTTA 13531 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTGA 186 | | | || ||||||| |||| | | | | | | |||| || ||| ||| | Sbjct 13530 GTCTGTAAAAAACCTTAAAATTAGAA---GTTAGATATAAATCCAGCCCCACTTTATTAA 13474 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||| | ||| | ||||||||| | || ||||| ||||| Sbjct 13473 ATAAGTAAAAAAATAATAGGAGTAATAATATTTCACTAATACTAAA---GCTCCTACTTA 13417 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| |||| | | | ||| | || | |||||||| ||||| || ||| ||||| Sbjct 13416 TTCTATACCTTTTATATTTTTTTATAATATTAAACTAGAGTTAAGCTTAATAGGATCTTC 13357 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| || |||| | || | ||| ||| ||||| ||| ||| |||||||| | Sbjct 13356 TTTCCCTACTAATTCTACTAAACTTATTCTCTTAGCTGTAATTTTACTAAATAGTAGAAA 13297 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 | | ||| ||||||| |||||| ||| || | ||||||||||| | ||| ||| Sbjct 13296 GAAATAGTAGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAATAAGGTATT 13237 Query 427 TGGCTACCTTAAGAG 441 | ||||||||||||| Sbjct 13236 TAGCTACCTTAAGAG 13222 >seq1304 Length=9648 Score = 181 bits (200), Expect = 3e-43 Identities = 124/140 (89%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||||||| || |||| | |||||| ||||||| ||||| ||||||||||||||| Sbjct 2385 TCTTCTTTCCCCACTAATTCTACTAAGCCCATTCCCTTAGCTGTAGTTTCGCTAGATAGT 2444 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||||||||||||| |||||||| |||||| |||||| || |||||||||||||| || || Sbjct 2445 AGATAGGGACAGTAGGAATCTCATTAATCTATTCATACGTGTCACTAATTAGATAACAAG 2504 Query 422 GCATTTGGCTACCTTAAGAG 441 |||||| ||||||||||||| Sbjct 2505 GCATTTAGCTACCTTAAGAG 2524 Score = 174 bits (192), Expect = 5e-41 Identities = 214/291 (74%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| ||||||||| |||||||| | ||||||||||| |||| | |||| Sbjct 1747 CTTTTATTCTACTAGAGATTTCTATTCTCCATAAACCCCCCTTAGGATACCTACATTATA 1806 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||| | | ||||||| ||||||||||||||||||| | | |||| | Sbjct 1807 GTTTAACAGATATACTACCCCAGCTAAACTCCCCACCTGACAATATTTTTAACCTAAGTT 1866 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | || ||||||| |||||| | | | || |||| || ||||||| | Sbjct 1867 AGCCCACAAAAAACCTTAAAACCAGAAGTTAGAC--ATAAATCCAGCCCCACTTCATTAA 1924 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| ||||| |||||||| || | || ||| |||| || Sbjct 1925 ATAAGTAAAAAAACAATAGAAGTAGTAATATTTCACCAGCACTAAA---GCTTCCACCTA 1981 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| | || |||||||| | | |||| ||||||| ||| Sbjct 1982 TTCTACACCTCCTATATCTTTTCACAATATTAAATTAGAATCAAGCTTAAC 2032 >seq1273 Length=10531 Score = 174 bits (192), Expect = 5e-41 Identities = 216/293 (74%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||||| ||||| ||||||||| ||||| || || ||||||||||| || | |||| Sbjct 2270 TCTTTTATTCTACTAGAGATTTCTATTCTCTATAAGCCCCCCTTAGGATACTTATATTAT 2329 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||||||||||| | || ||||||||||||||||||||| ||||| || | |||| || Sbjct 2330 AGTTTAACAGATATACCACCCCAGCCAAACTCCCCACCTAACAATATCTTTAACCTAAAT 2389 Query 126 CGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATT 184 | ||| | || ||||||| | |||| | | | || |||| || ||| ||| Sbjct 2390 CAGCCTACAAAAAACCTTAAAACTAGAA---GTTAAATATAAATCCAGCCCCACTTTATT 2446 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 | ||||||||||||| |||| || | ||||||||| || ||| ||||||| Sbjct 2447 AAATAAGTAAAAAAACAATAAAAATAATAATATTTCACTAGCATTAAAA---CTCCCACC 2503 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||||| | || |||||||| || |||||||| ||||| ||| Sbjct 2504 TATTCTACACCTCCTATATCTTTTCACAATATCAAACTAGAGTTAAGCTTAAC 2556 Score = 89.7 bits (98), Expect = 2e-15 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||| ||| || |||| | || | ||||||| ||| | |||| ||||||||| Sbjct 2909 TCTTCTTTTCCCACTAATTCTACTAAACTTATTCCCTTAGCTATAATTTCACTAGATAGT 2968 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 | |||| || ||| |||||| |||||| ||| || | | ||||||||||| | | Sbjct 2969 AAATAGAGATAGTAAGAATCTTATTAATCTATTTATACATATTACTAATTAGATAATAAA 3028 Query 422 GCATTTGGCTACCTTAA 438 | |||| |||||||||| Sbjct 3029 GTATTTAGCTACCTTAA 3045 >seq1268 Length=10630 Score = 163 bits (180), Expect = 9e-38 Identities = 189/252 (75%), Gaps = 7/252 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| ||||||||| ||||| || || ||| ||||||||| | | |||| Sbjct 8343 CTTTTATTCTACTAGAGATTTCTATTCTCTATAAGCCCCTCTTAGGACATTTACATTATA 8284 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||| | || | ||||| ||||||||||||||| ||| || | |||| | || Sbjct 8283 GTTTAACAGATATACCACTCCAGCTAAACTCCCCACCTGATAATATCTTTAACCTGAGTC 8224 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTG 185 ||| ||||||||||||| |||||| | | | | || |||| || || ||| Sbjct 8223 AGCCTACGAAGGACCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCATTTTATTA 8167 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | ||| ||||||||| ||||| ||||| |||||||||| ||||| || | | | || | Sbjct 8166 AATAAATAAAAAAACAATAAGAGTAGTAGTATTTCACTGGCGCCAAA---GTTTCTACCT 8110 Query 246 ATTCTACACCTC 257 ||| || ||||| Sbjct 8109 ATTTTATACCTC 8098 Score = 140 bits (154), Expect = 1e-30 Identities = 115/140 (82%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| || |||| || || ||| ||| ||| || | ||||||||||||||| Sbjct 7705 TCTTCTTTCCCTACTAATTCTGCTAAACCCATTCTCTTAACTATAGTTTCGCTAGATAGT 7646 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||||| || ||||||||||| |||||| |||||| || ||||||||||||| | || Sbjct 7645 AGATAGAGATAGTGGGAATCTTATTAATCTATTCATACGTATCACTAATTAGATAATAAG 7586 Query 422 GCATTTGGCTACCTTAAGAG 441 | |||| ||||||||||||| Sbjct 7585 GTATTTAGCTACCTTAAGAG 7566 Score = 105 bits (116), Expect = 2e-20 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||| |||||||||||| | |||||||| ||||| ||| |||| ||||||||| | ||||| Sbjct 7230 AGTTATAGTTACTCCCACTGTTTACCCACGCTTAGTTAAATTACTTCACTTTAATATTCA 7171 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 || ||| |||||||||||||| ||| |||| ||||||| Sbjct 7170 GAATACTAAGCAGAAATCACATTACGTTAACACTACTTTCT 7130 >seq1274 Length=10448 Score = 156 bits (172), Expect = 1e-35 Identities = 121/144 (84%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || |||||||||||| ||||||| |||| || ||||| || ||| | ||||||||||| Sbjct 7741 AGAGTCTTCTTTCCCTACTGATTCTACCAAACCTGTTCCTTTAGCTATAGTTTCGCTAGA 7682 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||| |||||| |||||||||||||| |||||| | | ||||||||||||| | Sbjct 7681 TAGTAGATAGAGACAGTAAGAATCTCGTTAATCTATTCATACACATCACTAATTAGATAA 7622 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 ||| |||| ||||||||||||| Sbjct 7621 TAAGGTATTTAGCTACCTTAAGAG 7598 Score = 143 bits (158), Expect = 9e-32 Identities = 208/291 (71%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| || |||||| ||||| || | | ||||||||| || | |||||| | Sbjct 8374 TTTTATTCTACTAGAAATTTCTATTCTCTATAAACCTCCCTTAGGATACTTACGTTATAG 8315 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| || | ||||| |||||||| || | | ||| || |||||| ||| Sbjct 8314 TTTAATAGATATGTTACTCCAGCTAAACTCCCTACTTAATAATATCTTCAACCTAAATCA 8255 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 ||| |||||||||||||| | |||| | | | | || |||| ||| ||| ||| | Sbjct 8254 GCCTGCGAAGGACCTTAAAACTAGAA---GTTAGATATAAATCCAGCTCCACTTTATTAA 8198 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||| |||| |||||||||| | ||| || ||||||| Sbjct 8197 ATAAGTAAAAAAATAATAGAAATAGTAGTATTTCACTAATACTAAAA---CTTCCACTTA 8141 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||| | | ||||| || | |||||||| || |||||| Sbjct 8140 TTCTACACCTTCTATATTTTTTCATAATATTAAACTAGAGTTAAACTCAAC 8090 >seq1263 Length=10760 Score = 143 bits (158), Expect = 9e-32 Identities = 208/291 (71%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| | ||| ||||||||| ||||| || || ||||||||| |||| |||| | Sbjct 8217 TTTTATTTTACTAGAGATTTCTATTCTCTATAAGCTTCCCTTAGGATACCTATATTATAG 8158 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| ||| | ||| ||||| ||||| ||| ||| || | |||| || ||| Sbjct 8157 TTTAACAGATATGCTACTTTAGCTAAACTTCCCACTTGATAATATCTTTAACCTGGGTCG 8098 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 ||| |||||| ||||||| | |||| | | | | || |||| | ||| ||| | Sbjct 8097 GCCTGCGAAGAACCTTAAAACTAGAA---GTTAGATATAAATTCAGTCCTACTTTATTAA 8041 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||||| ||||| |||||||||| |||| || ||| |||| || Sbjct 8040 ATAAGTAAAAAAATAATAAGAGTAGTAGTATTTCACTGGCGCTAAA---GCTTCCACCTA 7984 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||| | ||| | | ||| | || | | |||||| ||||| ||| Sbjct 7983 TTCTATATTTCTTATATTTTTTTATAATATTAAATTAGAGTTAAGCTTAAC 7933 Score = 116 bits (128), Expect = 1e-23 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || |||||||||||| || |||| || ||||| || || ||| | |||||||||| Sbjct 7584 AGAGTCTTCTTTCCCTACTAATTCTGCTAAGCCTATTTTTTTAGCTATAATTTCGCTAGA 7525 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||| | ||||||||||| |||||| ||| ||| | ||||||||||| | Sbjct 7524 TAGTAGATAGGAATAGTGGGAATCTTATTAATCTATTTATGTATATTACTAATTAGATAA 7465 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 ||| |||| |||||||||| || Sbjct 7464 TAAGGTATTTAGCTACCTTAAAAG 7441 >seq1250 Length=11053 Score = 143 bits (158), Expect = 9e-32 Identities = 118/144 (82%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || ||||||||||||| || |||| | |||||||||||||| ||||| |||| ||||| Sbjct 7667 AGAGTCTTCTTTCCCCACTAATTCTACTAAGCCCGTTCCCTTAGCTGTAGTTTTACTAGA 7608 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||| ||| ||||||| |||||| ||| || | | ||||||||||| | Sbjct 7607 TAGTAGATAGGGATAGTAGGAATCTTATTAATCTATTTATATGTATTACTAATTAGATAA 7548 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 ||| |||| ||||||||||||| Sbjct 7547 TAAGGTATTTAGCTACCTTAAGAG 7524 Score = 98.7 bits (108), Expect = 3e-18 Identities = 198/291 (68%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| | ||| |||||||||||| || || || ||||||||||| | || | |||| | Sbjct 8300 TTTTATTTTACTAGAGATTTCTGTTTTCTATAAGCCCCCCTTAGGATATCTACATTATAG 8241 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| | | ||| |||| ||||| || || | | ||| | | || | |||| Sbjct 8240 TTTAACAGATATACTGCCTCAGCTAAACTTCCTACTTAATAATATTTTTAATCTGGATTA 8181 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 || ||||| ||||| |||| | | | | || ||| | || ||| | Sbjct 8180 GCTTATAAAGGATCTTAAAATTAGAA---GTTAGATATAAATTCAGCTTTATTTTATTAA 8124 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | |||| |||||| ||| | || | | ||| ||||| Sbjct 8123 ATAAGTAAAAAAACAATAGGAATAGTAGTATTTTACT---GACGTTAAAGTTCCTACTTA 8067 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 || || | ||| | || ||| | || || |||||||| ||||| ||| Sbjct 8066 TTTTATATTTCTTATGTTTTTTTATAATGTTAAACTAGAGTTAAGCTTAAC 8016 >seq1315 Length=9210 Score = 134 bits (148), Expect = 5e-29 Identities = 206/291 (71%), Gaps = 7/291 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| | ||| ||||||||| ||||| || || ||||||||| | || | |||||| | Sbjct 667 TTTTATTTTACTAGAGATTTCTATTCTCTATAAGCCCCCCTTAGAATACTTACGTTATAG 726 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| ||| ||||||| ||||| ||||| | | ||| || | || | | | Sbjct 727 TTTAACAGATATGCTGCCCCAGTTAAACTTCCCACTTAATAATATCTTTAATCTAGGTTA 786 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 || | ||||||||||| | |||| | | | | || | || ||| ||| ||| | Sbjct 787 ACCTACAAAGGACCTTAAAACTAGAA---GTTAGATATAAATCTAGCTCCACTTTATTAA 843 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||||| ||||| ||||||||| | | || ||| ||||||| Sbjct 844 ATAAGTAAAAAAATAATAAGAGTAGTAATATTTCACTAACACTAAA---GCTTCCACTTA 900 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 || || | ||| | || ||||| || | |||||||| || || ||| Sbjct 901 TTTTATATCTCCTATATCTTTTCATAATATTAAACTAGAGTTAAACTTAAC 951 Score = 107 bits (118), Expect = 6e-21 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || |||||||||||| || |||| | ||||| ||||| || ||||| |||| ||| | Sbjct 1300 AGAGTCTTCTTTCCCTACTAATTCTACTAAGCCTGTTCCTTTAGCTGTAATTTCACTAAA 1359 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||| ||||| |||||| ||||| ||| || | ||||||||||| | Sbjct 1360 TAGTAGATAGAAACAGTAAGAATCTTATTAATTTATTTATATATATTACTAATTAGATAA 1419 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 ||| |||| ||||||||||||| Sbjct 1420 TAAGGTATTTAGCTACCTTAAGAG 1443 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||| ||| ||||||||||| |||||| | || ||| |||| ||||| ||| | ||||| Sbjct 1779 AGTTATAATTACTCCCGCCATTTACCTACATTTAGTTAAATTACTTCATTTTAATATTCA 1838 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 || ||| | |||||||||||| ||| || | |||||||| Sbjct 1839 GAATACTAAGTAGAAATCACATTACGTTAATACCACTTTCT 1879 >seq1299 Length=9828 Score = 125 bits (138), Expect = 2e-26 Identities = 204/291 (70%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||||| ||||| || || || |||||| |||| |||| | Sbjct 8228 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGCTTCCTTTAGGATACCTATATTATAG 8169 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | | | ||||| |||||||| || | | ||| | | || | | | Sbjct 8168 TTTAATAGATATACTACTCCAGCTAAACTCCCTACTTAATAATATTTTTAATTTAGGTTG 8109 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTGA 186 || || ||| | ||||| |||||| | | | | | | |||| || ||| ||| | Sbjct 8108 GCTCGTAAAGAATCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCACTTTATTAA 8052 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| || | ||||||||| ||| || |||||||| || Sbjct 8051 ATAAGTAAAAAAACAATAAAAATAATAATATTTCACTAGCGTTAAA---GCTCCCACCTA 7995 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| | || |||||||| | |||||||| ||||| ||| Sbjct 7994 TTCTACACCTCCTATATCTTTTCACAATATTAAACTAGAGTTAAGCTTAAC 7944 Score = 100 bits (110), Expect = 9e-19 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| || |||| | || | ||||||| ||| | |||| ||||||||| Sbjct 7591 TCTTCTTTCCCTACTAATTCTACTAAACTTATTCCCTTAGCTATAGTTTTACTAGATAGT 7532 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 | ||||| | ||||||||||| |||||| ||| || | ||||||||||| | | Sbjct 7531 AAATAGGAATAGTGGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAATAAA 7472 Query 422 GCATTTGGCTACCTTAAGAG 441 | |||| ||||||||||||| Sbjct 7471 GTATTTAGCTACCTTAAGAG 7452 >seq1262 Length=10766 Score = 125 bits (138), Expect = 2e-26 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 || || ||||||| | ||||||| || || | ||||||| | | | ||||| ||||| Sbjct 3272 AGAGTTTTCTTTCTCTACTGATTCTGCTAAACTTATTCCCTTAGTTATAGTTTCACTAGA 3331 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||| ||||||||||| ||||| ||| || | || ||||||||||||| Sbjct 3332 TAGTAGATAGGGATAGTGGGAATCTTATTAATTTATTTATATGTGTTACTAATTAGATGA 3391 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 |||| |||| | ||||||||||| Sbjct 3392 TGAGGTATTTAGTTACCTTAAGAG 3415 Score = 104 bits (114), Expect = 8e-20 Identities = 199/291 (68%), Gaps = 7/291 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||||| ||||| || | ||||||||||| | | | |||| | Sbjct 2639 TTTTATTCTACTAGAGATTTCTATTCTCTATAAACCCCCCTTAGGATATTTACATTATAG 2698 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||| |||| | | | ||| ||||| ||||| | | ||| | | ||| ||| Sbjct 2699 TTTAATAGATATACTATTCTAGCTAAACTTCCCACTTAATAATATTTTTAACTTAGATTA 2758 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186 ||| |||||||| |||| | |||| | | | | || | || ||| ||| ||| | Sbjct 2759 GCCTGCGAAGGATTTTAAAACTAGAA---GTTAGATATAAATCTAGCTCCACTTTATTAA 2815 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||||| ||||| ||||| | | | || | ||| || || Sbjct 2816 ATAAGTAAAAAAATAATAAGAGTAGTAATATTTTATTAGTATTAAA---GTTCCTACCTA 2872 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 || ||||||||| | || ||| | || | |||||||| ||||| ||| Sbjct 2873 TTTTACACCTCTTATGTTTTTTTATAATATTAAACTAGAGTTAAGCTTAAC 2923 >seq1325 Length=9050 Score = 122 bits (134), Expect = 3e-25 Identities = 203/290 (70%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| ||||| ||||||| | ||||| || || ||||||||||| || | |||| | Sbjct 610 TTTTATTCTACTAGAGATTTTTATTCTCTATAAGCCCCCCTTAGGATACTTATATTATAG 669 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| | || || | | |||||||| || | | ||| || |||||| || Sbjct 670 TTTAACAGATATACCATCCTAACTAAACTCCCTACTTAATAATATCTTCAACCTAAATTA 729 Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGAT 187 |||| | || |||||||| | ||||| | || | || ||| ||| ||| | Sbjct 730 GCCCACAAAAGACCTTAAAATTA-AAAATTAAATAT-AAATCTAGCTCCACTTTATTAAA 787 Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTAT 247 ||| ||||||||| ||| | || | ||||||||| || | || | ||| |||||| Sbjct 788 TAAATAAAAAAACAATAGGAATAATAATATTTCACTAGCACTAAA---GTTCCTACTTAT 844 Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||| |||| | | || ||||| || | |||||||| || |||||| Sbjct 845 TCTATACCTTTTATATCTTTTCATAATATTAAACTAGAGTTAAACTCAAC 894 Score = 105 bits (116), Expect = 2e-20 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| || |||| | || | ||||||| ||| | |||||||| | Sbjct 1243 AGGGTCTTCTTTCCCTACTAATTCTACTAAACTTATTCCCTTAGCTATAATTTCGCTAAA 1302 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| |||| || ||| ||||||| |||||| ||| || | ||||||||||| | Sbjct 1303 TAGTAAATAGAGATAGTAGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAA 1362 Query 418 CGAGGCATTTGGCTACCTTAAGA 440 || | |||| |||||||||||| Sbjct 1363 TGAAGTATTTAGCTACCTTAAGA 1385 >seq74 Length=210584 Score = 87.8 bits (96), Expect = 6e-15 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||||||| |||| |||| | || || | ||||||||||||| ||||||||| || Sbjct 161678 ACTCCCGCCGCTTACT-GCGCGTCGTCGAGAT-CTTCACTTTGACAACCAGAGCACTAGG 161735 Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||| ||||| |||||||| ||||||||| Sbjct 161736 CAGAAAACACATCGCGTCAACGCCACTTTCTG 161767 >seq1302 Length=9750 Score = 86.0 bits (94), Expect = 2e-14 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||| ||||||| | || || ||||||| || | ||||| |||||||||| Sbjct 7262 TTCTTTCTTTACTGATTCTACTAAACCTATTCCCTTAACTATAGTTTCACTAGATAGTAA 7203 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||| | ||| ||||||| |||||| ||| || | ||||||||||| | | | Sbjct 7202 ATAGGAATAGTAGGAATCTTATTAATCTATTTATAAATATTACTAATTAGATAATAAAGT 7143 Query 424 ATTTGGCTACCTTAA 438 |||| |||||||||| Sbjct 7142 ATTTAGCTACCTTAA 7128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635169634336