Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693015.2_20201
7-02-04] 1,857 sequences; 97,411,422 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1236 367 4e-99
seq1278 197 5e-48
seq58 183 1e-43
seq1304 181 3e-43
seq1273 174 5e-41
seq1268 163 9e-38
seq1274 156 1e-35
seq1263 143 9e-32
seq1250 143 9e-32
seq1315 134 5e-29
seq1299 125 2e-26
seq1262 125 2e-26
seq1325 122 3e-25
seq74 87.8 6e-15
seq1302 86.0 2e-14
>seq1236
Length=11430
Score = 367 bits (406), Expect = 4e-99
Identities = 257/291 (88%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1564 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1623
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1624 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1683
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || || |||| ||||||||||||
Sbjct 1684 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTCATTGA 1741
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 1742 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1798
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||| | ||| |||||||| ||| ||||||||||||||||||
Sbjct 1799 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 1849
Score = 251 bits (278), Expect = 2e-64
Identities = 142/144 (99%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2198 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 2257
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2258 TAGTAGATAGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGA 2317
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||||||||||||||||||||||||
Sbjct 2318 CGAGGCATTTGGCTACCTTAAGAG 2341
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2676 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 2735
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2736 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2778
>seq1278
Length=10311
Score = 197 bits (218), Expect = 5e-48
Identities = 220/291 (76%), Gaps = 7/291 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||||| ||||| || ||||||||||||||||||| |||||| |
Sbjct 1938 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGTCCCCCTTAGGACACCTACGTTATAG 1997
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| ||| ||| | | ||||||||||||||| ||| | |||||| | |
Sbjct 1998 TTTAACAGATATGCTACCCTAACTAAACTCCCCACCTGATAATATTTTCAACCTAAGTTG 2057
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
||| || || |||||||| | |||| | | | | || |||| ||| ||| ||| |
Sbjct 2058 GCCTGCAAAAGACCTTAAAACTAGAA---GTTAGATATAAATCCAGCTCCACTTTATTAA 2114
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||| | |||||||||| || ||||| ||| |||||||
Sbjct 2115 ATAAGTAAAAAAACAATAGGAGTAATAGTATTTCACTAGCACCGAA---GCTTCCACTTA 2171
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||| |||| | | ||||| || || |||| ||| |||||||||
Sbjct 2172 TTCTATACCTTCTATATTTTTTCATAATGTTAAACTAAAGTTAAGCTCAAC 2222
Score = 116 bits (128), Expect = 1e-23
Identities = 109/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||| || |||| | || || |||| || || | |||||||||||||||
Sbjct 2575 TCTTCTTTCCCCACTAATTCTACTAAACCTATTCCTTTAACTATAGTTTCGCTAGATAGT 2634
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
| |||| |||||| ||||||||||||| ||| || | | ||||||||||| || ||
Sbjct 2635 AAATAGAGACAGTAAGAATCTCGTTAATTTATTTATACATATTACTAATTAGATAACAAG 2694
Query 422 GCATTTGGCTACCTTAAGA 440
| |||| |||||||||||
Sbjct 2695 GTATTTAACTACCTTAAGA 2713
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505
|||||||||||| | ||||||| ||||| || |||| ||||||||| |||||||||||
Sbjct 3054 ATAGTTACTCCCACTATTTACCCACGCTTAATTAAATTACTTCACTTTAACATTCAGAGC 3113
Query 506 ACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
| | ||||||||||| ||| | | || | ||||||||
Sbjct 3114 ATTAGGCAGAAATCATATTACATTAATACCACTTTCT 3150
>seq58
Length=230734
Score = 183 bits (202), Expect = 1e-43
Identities = 303/435 (70%), Gaps = 7/435 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||||| ||||| || || |||||||||| | || |||| |
Sbjct 13650 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGCTCCCCTTAGGATATCTATATTATAG 13591
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | || | | ||| ||||||||||| | | ||| || | |||| |
Sbjct 13590 TTTAATAGATATACCACTCTAGCTAAACTCCCCACTTAATAATATCTTTAACCTAAGTTA 13531
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTGA 186
| | | || ||||||| |||| | | | | | | |||| || ||| ||| |
Sbjct 13530 GTCTGTAAAAAACCTTAAAATTAGAA---GTTAGATATAAATCCAGCCCCACTTTATTAA 13474
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||| | ||| | ||||||||| | || ||||| |||||
Sbjct 13473 ATAAGTAAAAAAATAATAGGAGTAATAATATTTCACTAATACTAAA---GCTCCTACTTA 13417
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||| |||| | | | ||| | || | |||||||| ||||| || ||| |||||
Sbjct 13416 TTCTATACCTTTTATATTTTTTTATAATATTAAACTAGAGTTAAGCTTAATAGGATCTTC 13357
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||| || |||| | || | ||| ||| ||||| ||| ||| |||||||| |
Sbjct 13356 TTTCCCTACTAATTCTACTAAACTTATTCTCTTAGCTGTAATTTTACTAAATAGTAGAAA 13297
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
| | ||| ||||||| |||||| ||| || | ||||||||||| | ||| |||
Sbjct 13296 GAAATAGTAGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAATAAGGTATT 13237
Query 427 TGGCTACCTTAAGAG 441
| |||||||||||||
Sbjct 13236 TAGCTACCTTAAGAG 13222
>seq1304
Length=9648
Score = 181 bits (200), Expect = 3e-43
Identities = 124/140 (89%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||| || |||| | |||||| ||||||| ||||| |||||||||||||||
Sbjct 2385 TCTTCTTTCCCCACTAATTCTACTAAGCCCATTCCCTTAGCTGTAGTTTCGCTAGATAGT 2444
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||||||||||||| |||||||| |||||| |||||| || |||||||||||||| || ||
Sbjct 2445 AGATAGGGACAGTAGGAATCTCATTAATCTATTCATACGTGTCACTAATTAGATAACAAG 2504
Query 422 GCATTTGGCTACCTTAAGAG 441
|||||| |||||||||||||
Sbjct 2505 GCATTTAGCTACCTTAAGAG 2524
Score = 174 bits (192), Expect = 5e-41
Identities = 214/291 (74%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||||| ||||||||| |||||||| | ||||||||||| |||| | ||||
Sbjct 1747 CTTTTATTCTACTAGAGATTTCTATTCTCCATAAACCCCCCTTAGGATACCTACATTATA 1806
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||| | | ||||||| ||||||||||||||||||| | | |||| |
Sbjct 1807 GTTTAACAGATATACTACCCCAGCTAAACTCCCCACCTGACAATATTTTTAACCTAAGTT 1866
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||| | || ||||||| |||||| | | | || |||| || ||||||| |
Sbjct 1867 AGCCCACAAAAAACCTTAAAACCAGAAGTTAGAC--ATAAATCCAGCCCCACTTCATTAA 1924
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| ||||| |||||||| || | || ||| |||| ||
Sbjct 1925 ATAAGTAAAAAAACAATAGAAGTAGTAATATTTCACCAGCACTAAA---GCTTCCACCTA 1981
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||| | || |||||||| | | |||| ||||||| |||
Sbjct 1982 TTCTACACCTCCTATATCTTTTCACAATATTAAATTAGAATCAAGCTTAAC 2032
>seq1273
Length=10531
Score = 174 bits (192), Expect = 5e-41
Identities = 216/293 (74%), Gaps = 7/293 (2%)
Strand=Plus/Plus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||||| ||||| ||||||||| ||||| || || ||||||||||| || | ||||
Sbjct 2270 TCTTTTATTCTACTAGAGATTTCTATTCTCTATAAGCCCCCCTTAGGATACTTATATTAT 2329
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
||||||||||| | || ||||||||||||||||||||| ||||| || | |||| ||
Sbjct 2330 AGTTTAACAGATATACCACCCCAGCCAAACTCCCCACCTAACAATATCTTTAACCTAAAT 2389
Query 126 CGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATT 184
| ||| | || ||||||| | |||| | | | || |||| || ||| |||
Sbjct 2390 CAGCCTACAAAAAACCTTAAAACTAGAA---GTTAAATATAAATCCAGCCCCACTTTATT 2446
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
| ||||||||||||| |||| || | ||||||||| || ||| |||||||
Sbjct 2447 AAATAAGTAAAAAAACAATAAAAATAATAATATTTCACTAGCATTAAAA---CTCCCACC 2503
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||||| | || |||||||| || |||||||| ||||| |||
Sbjct 2504 TATTCTACACCTCCTATATCTTTTCACAATATCAAACTAGAGTTAAGCTTAAC 2556
Score = 89.7 bits (98), Expect = 2e-15
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||| ||| || |||| | || | ||||||| ||| | |||| |||||||||
Sbjct 2909 TCTTCTTTTCCCACTAATTCTACTAAACTTATTCCCTTAGCTATAATTTCACTAGATAGT 2968
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
| |||| || ||| |||||| |||||| ||| || | | ||||||||||| | |
Sbjct 2969 AAATAGAGATAGTAAGAATCTTATTAATCTATTTATACATATTACTAATTAGATAATAAA 3028
Query 422 GCATTTGGCTACCTTAA 438
| |||| ||||||||||
Sbjct 3029 GTATTTAGCTACCTTAA 3045
>seq1268
Length=10630
Score = 163 bits (180), Expect = 9e-38
Identities = 189/252 (75%), Gaps = 7/252 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||||| ||||||||| ||||| || || ||| ||||||||| | | ||||
Sbjct 8343 CTTTTATTCTACTAGAGATTTCTATTCTCTATAAGCCCCTCTTAGGACATTTACATTATA 8284
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||| | || | ||||| ||||||||||||||| ||| || | |||| | ||
Sbjct 8283 GTTTAACAGATATACCACTCCAGCTAAACTCCCCACCTGATAATATCTTTAACCTGAGTC 8224
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTG 185
||| ||||||||||||| |||||| | | | | || |||| || || |||
Sbjct 8223 AGCCTACGAAGGACCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCATTTTATTA 8167
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| ||| ||||||||| ||||| ||||| |||||||||| ||||| || | | | || |
Sbjct 8166 AATAAATAAAAAAACAATAAGAGTAGTAGTATTTCACTGGCGCCAAA---GTTTCTACCT 8110
Query 246 ATTCTACACCTC 257
||| || |||||
Sbjct 8109 ATTTTATACCTC 8098
Score = 140 bits (154), Expect = 1e-30
Identities = 115/140 (82%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
||||||||||| || |||| || || ||| ||| ||| || | |||||||||||||||
Sbjct 7705 TCTTCTTTCCCTACTAATTCTGCTAAACCCATTCTCTTAACTATAGTTTCGCTAGATAGT 7646
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|||||| || ||||||||||| |||||| |||||| || ||||||||||||| | ||
Sbjct 7645 AGATAGAGATAGTGGGAATCTTATTAATCTATTCATACGTATCACTAATTAGATAATAAG 7586
Query 422 GCATTTGGCTACCTTAAGAG 441
| |||| |||||||||||||
Sbjct 7585 GTATTTAGCTACCTTAAGAG 7566
Score = 105 bits (116), Expect = 2e-20
Identities = 84/101 (83%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501
||| |||||||||||| | |||||||| ||||| ||| |||| ||||||||| | |||||
Sbjct 7230 AGTTATAGTTACTCCCACTGTTTACCCACGCTTAGTTAAATTACTTCACTTTAATATTCA 7171
Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
|| ||| |||||||||||||| ||| |||| |||||||
Sbjct 7170 GAATACTAAGCAGAAATCACATTACGTTAACACTACTTTCT 7130
>seq1274
Length=10448
Score = 156 bits (172), Expect = 1e-35
Identities = 121/144 (84%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|| |||||||||||| ||||||| |||| || ||||| || ||| | |||||||||||
Sbjct 7741 AGAGTCTTCTTTCCCTACTGATTCTACCAAACCTGTTCCTTTAGCTATAGTTTCGCTAGA 7682
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||| |||||| |||||||||||||| |||||| | | ||||||||||||| |
Sbjct 7681 TAGTAGATAGAGACAGTAAGAATCTCGTTAATCTATTCATACACATCACTAATTAGATAA 7622
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||| |||| |||||||||||||
Sbjct 7621 TAAGGTATTTAGCTACCTTAAGAG 7598
Score = 143 bits (158), Expect = 9e-32
Identities = 208/291 (71%), Gaps = 7/291 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| || |||||| ||||| || | | ||||||||| || | |||||| |
Sbjct 8374 TTTTATTCTACTAGAAATTTCTATTCTCTATAAACCTCCCTTAGGATACTTACGTTATAG 8315
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| || | ||||| |||||||| || | | ||| || |||||| |||
Sbjct 8314 TTTAATAGATATGTTACTCCAGCTAAACTCCCTACTTAATAATATCTTCAACCTAAATCA 8255
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
||| |||||||||||||| | |||| | | | | || |||| ||| ||| ||| |
Sbjct 8254 GCCTGCGAAGGACCTTAAAACTAGAA---GTTAGATATAAATCCAGCTCCACTTTATTAA 8198
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||| |||| |||||||||| | ||| || |||||||
Sbjct 8197 ATAAGTAAAAAAATAATAGAAATAGTAGTATTTCACTAATACTAAAA---CTTCCACTTA 8141
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||| | | ||||| || | |||||||| || ||||||
Sbjct 8140 TTCTACACCTTCTATATTTTTTCATAATATTAAACTAGAGTTAAACTCAAC 8090
>seq1263
Length=10760
Score = 143 bits (158), Expect = 9e-32
Identities = 208/291 (71%), Gaps = 7/291 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| | ||| ||||||||| ||||| || || ||||||||| |||| |||| |
Sbjct 8217 TTTTATTTTACTAGAGATTTCTATTCTCTATAAGCTTCCCTTAGGATACCTATATTATAG 8158
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| ||| | ||| ||||| ||||| ||| ||| || | |||| || |||
Sbjct 8157 TTTAACAGATATGCTACTTTAGCTAAACTTCCCACTTGATAATATCTTTAACCTGGGTCG 8098
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
||| |||||| ||||||| | |||| | | | | || |||| | ||| ||| |
Sbjct 8097 GCCTGCGAAGAACCTTAAAACTAGAA---GTTAGATATAAATTCAGTCCTACTTTATTAA 8041
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||||| ||||| |||||||||| |||| || ||| |||| ||
Sbjct 8040 ATAAGTAAAAAAATAATAAGAGTAGTAGTATTTCACTGGCGCTAAA---GCTTCCACCTA 7984
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||| | ||| | | ||| | || | | |||||| ||||| |||
Sbjct 7983 TTCTATATTTCTTATATTTTTTTATAATATTAAATTAGAGTTAAGCTTAAC 7933
Score = 116 bits (128), Expect = 1e-23
Identities = 112/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|| |||||||||||| || |||| || ||||| || || ||| | ||||||||||
Sbjct 7584 AGAGTCTTCTTTCCCTACTAATTCTGCTAAGCCTATTTTTTTAGCTATAATTTCGCTAGA 7525
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||| | ||||||||||| |||||| ||| ||| | ||||||||||| |
Sbjct 7524 TAGTAGATAGGAATAGTGGGAATCTTATTAATCTATTTATGTATATTACTAATTAGATAA 7465
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||| |||| |||||||||| ||
Sbjct 7464 TAAGGTATTTAGCTACCTTAAAAG 7441
>seq1250
Length=11053
Score = 143 bits (158), Expect = 9e-32
Identities = 118/144 (82%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|| ||||||||||||| || |||| | |||||||||||||| ||||| |||| |||||
Sbjct 7667 AGAGTCTTCTTTCCCCACTAATTCTACTAAGCCCGTTCCCTTAGCTGTAGTTTTACTAGA 7608
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||| ||| ||||||| |||||| ||| || | | ||||||||||| |
Sbjct 7607 TAGTAGATAGGGATAGTAGGAATCTTATTAATCTATTTATATGTATTACTAATTAGATAA 7548
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||| |||| |||||||||||||
Sbjct 7547 TAAGGTATTTAGCTACCTTAAGAG 7524
Score = 98.7 bits (108), Expect = 3e-18
Identities = 198/291 (68%), Gaps = 7/291 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| | ||| |||||||||||| || || || ||||||||||| | || | |||| |
Sbjct 8300 TTTTATTTTACTAGAGATTTCTGTTTTCTATAAGCCCCCCTTAGGATATCTACATTATAG 8241
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| | | ||| |||| ||||| || || | | ||| | | || | ||||
Sbjct 8240 TTTAACAGATATACTGCCTCAGCTAAACTTCCTACTTAATAATATTTTTAATCTGGATTA 8181
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
|| ||||| ||||| |||| | | | | || ||| | || ||| |
Sbjct 8180 GCTTATAAAGGATCTTAAAATTAGAA---GTTAGATATAAATTCAGCTTTATTTTATTAA 8124
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | |||| |||||| ||| | || | | ||| |||||
Sbjct 8123 ATAAGTAAAAAAACAATAGGAATAGTAGTATTTTACT---GACGTTAAAGTTCCTACTTA 8067
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|| || | ||| | || ||| | || || |||||||| ||||| |||
Sbjct 8066 TTTTATATTTCTTATGTTTTTTTATAATGTTAAACTAGAGTTAAGCTTAAC 8016
>seq1315
Length=9210
Score = 134 bits (148), Expect = 5e-29
Identities = 206/291 (71%), Gaps = 7/291 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| | ||| ||||||||| ||||| || || ||||||||| | || | |||||| |
Sbjct 667 TTTTATTTTACTAGAGATTTCTATTCTCTATAAGCCCCCCTTAGAATACTTACGTTATAG 726
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| ||| ||||||| ||||| ||||| | | ||| || | || | | |
Sbjct 727 TTTAACAGATATGCTGCCCCAGTTAAACTTCCCACTTAATAATATCTTTAATCTAGGTTA 786
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
|| | ||||||||||| | |||| | | | | || | || ||| ||| ||| |
Sbjct 787 ACCTACAAAGGACCTTAAAACTAGAA---GTTAGATATAAATCTAGCTCCACTTTATTAA 843
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||||| ||||| ||||||||| | | || ||| |||||||
Sbjct 844 ATAAGTAAAAAAATAATAAGAGTAGTAATATTTCACTAACACTAAA---GCTTCCACTTA 900
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|| || | ||| | || ||||| || | |||||||| || || |||
Sbjct 901 TTTTATATCTCCTATATCTTTTCATAATATTAAACTAGAGTTAAACTTAAC 951
Score = 107 bits (118), Expect = 6e-21
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|| |||||||||||| || |||| | ||||| ||||| || ||||| |||| ||| |
Sbjct 1300 AGAGTCTTCTTTCCCTACTAATTCTACTAAGCCTGTTCCTTTAGCTGTAATTTCACTAAA 1359
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||| ||||| |||||| ||||| ||| || | ||||||||||| |
Sbjct 1360 TAGTAGATAGAAACAGTAAGAATCTTATTAATTTATTTATATATATTACTAATTAGATAA 1419
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||| |||| |||||||||||||
Sbjct 1420 TAAGGTATTTAGCTACCTTAAGAG 1443
Score = 84.2 bits (92), Expect = 7e-14
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501
||| ||| ||||||||||| |||||| | || ||| |||| ||||| ||| | |||||
Sbjct 1779 AGTTATAATTACTCCCGCCATTTACCTACATTTAGTTAAATTACTTCATTTTAATATTCA 1838
Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
|| ||| | |||||||||||| ||| || | ||||||||
Sbjct 1839 GAATACTAAGTAGAAATCACATTACGTTAATACCACTTTCT 1879
>seq1299
Length=9828
Score = 125 bits (138), Expect = 2e-26
Identities = 204/291 (70%), Gaps = 7/291 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||||| ||||| || || || |||||| |||| |||| |
Sbjct 8228 TTTTATTCTACTAGAGATTTCTATTCTCTATAAGCTTCCTTTAGGATACCTATATTATAG 8169
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | | | ||||| |||||||| || | | ||| | | || | | |
Sbjct 8168 TTTAATAGATATACTACTCCAGCTAAACTCCCTACTTAATAATATTTTTAATTTAGGTTG 8109
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGA-CCAGTTCCGCTTCATTGA 186
|| || ||| | ||||| |||||| | | | | | | |||| || ||| ||| |
Sbjct 8108 GCTCGTAAAGAATCTTAAAACCAGAA---GTTAGATATAAATCCAGCCCCACTTTATTAA 8052
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| |||| || | ||||||||| ||| || |||||||| ||
Sbjct 8051 ATAAGTAAAAAAACAATAAAAATAATAATATTTCACTAGCGTTAAA---GCTCCCACCTA 7995
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||||| | || |||||||| | |||||||| ||||| |||
Sbjct 7994 TTCTACACCTCCTATATCTTTTCACAATATTAAACTAGAGTTAAGCTTAAC 7944
Score = 100 bits (110), Expect = 9e-19
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
||||||||||| || |||| | || | ||||||| ||| | |||| |||||||||
Sbjct 7591 TCTTCTTTCCCTACTAATTCTACTAAACTTATTCCCTTAGCTATAGTTTTACTAGATAGT 7532
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
| ||||| | ||||||||||| |||||| ||| || | ||||||||||| | |
Sbjct 7531 AAATAGGAATAGTGGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAATAAA 7472
Query 422 GCATTTGGCTACCTTAAGAG 441
| |||| |||||||||||||
Sbjct 7471 GTATTTAGCTACCTTAAGAG 7452
>seq1262
Length=10766
Score = 125 bits (138), Expect = 2e-26
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|| || ||||||| | ||||||| || || | ||||||| | | | ||||| |||||
Sbjct 3272 AGAGTTTTCTTTCTCTACTGATTCTGCTAAACTTATTCCCTTAGTTATAGTTTCACTAGA 3331
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||| ||||||||||| ||||| ||| || | || |||||||||||||
Sbjct 3332 TAGTAGATAGGGATAGTGGGAATCTTATTAATTTATTTATATGTGTTACTAATTAGATGA 3391
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
|||| |||| | |||||||||||
Sbjct 3392 TGAGGTATTTAGTTACCTTAAGAG 3415
Score = 104 bits (114), Expect = 8e-20
Identities = 199/291 (68%), Gaps = 7/291 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||||| ||||| || | ||||||||||| | | | |||| |
Sbjct 2639 TTTTATTCTACTAGAGATTTCTATTCTCTATAAACCCCCCTTAGGATATTTACATTATAG 2698
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||| |||| | | | ||| ||||| ||||| | | ||| | | ||| |||
Sbjct 2699 TTTAATAGATATACTATTCTAGCTAAACTTCCCACTTAATAATATTTTTAACTTAGATTA 2758
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGT-GAAGACCAGTTCCGCTTCATTGA 186
||| |||||||| |||| | |||| | | | | || | || ||| ||| ||| |
Sbjct 2759 GCCTGCGAAGGATTTTAAAACTAGAA---GTTAGATATAAATCTAGCTCCACTTTATTAA 2815
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||||| ||||| ||||| | | | || | ||| || ||
Sbjct 2816 ATAAGTAAAAAAATAATAAGAGTAGTAATATTTTATTAGTATTAAA---GTTCCTACCTA 2872
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|| ||||||||| | || ||| | || | |||||||| ||||| |||
Sbjct 2873 TTTTACACCTCTTATGTTTTTTTATAATATTAAACTAGAGTTAAGCTTAAC 2923
>seq1325
Length=9050
Score = 122 bits (134), Expect = 3e-25
Identities = 203/290 (70%), Gaps = 5/290 (2%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| ||||| ||||||| | ||||| || || ||||||||||| || | |||| |
Sbjct 610 TTTTATTCTACTAGAGATTTTTATTCTCTATAAGCCCCCCTTAGGATACTTATATTATAG 669
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| | || || | | |||||||| || | | ||| || |||||| ||
Sbjct 670 TTTAACAGATATACCATCCTAACTAAACTCCCTACTTAATAATATCTTCAACCTAAATTA 729
Query 128 GCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGAT 187
|||| | || |||||||| | ||||| | || | || ||| ||| ||| |
Sbjct 730 GCCCACAAAAGACCTTAAAATTA-AAAATTAAATAT-AAATCTAGCTCCACTTTATTAAA 787
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTAT 247
||| ||||||||| ||| | || | ||||||||| || | || | ||| ||||||
Sbjct 788 TAAATAAAAAAACAATAGGAATAATAATATTTCACTAGCACTAAA---GTTCCTACTTAT 844
Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||| |||| | | || ||||| || | |||||||| || ||||||
Sbjct 845 TCTATACCTTTTATATCTTTTCATAATATTAAACTAGAGTTAAACTCAAC 894
Score = 105 bits (116), Expect = 2e-20
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||| || |||| | || | ||||||| ||| | |||||||| |
Sbjct 1243 AGGGTCTTCTTTCCCTACTAATTCTACTAAACTTATTCCCTTAGCTATAATTTCGCTAAA 1302
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||| |||| || ||| ||||||| |||||| ||| || | ||||||||||| |
Sbjct 1303 TAGTAAATAGAGATAGTAGGAATCTTATTAATCTATTTATATATATTACTAATTAGATAA 1362
Query 418 CGAGGCATTTGGCTACCTTAAGA 440
|| | |||| ||||||||||||
Sbjct 1363 TGAAGTATTTAGCTACCTTAAGA 1385
>seq74
Length=210584
Score = 87.8 bits (96), Expect = 6e-15
Identities = 76/92 (83%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511
|||||||||| |||| |||| | || || | ||||||||||||| ||||||||| ||
Sbjct 161678 ACTCCCGCCGCTTACT-GCGCGTCGTCGAGAT-CTTCACTTTGACAACCAGAGCACTAGG 161735
Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||| ||||| |||||||| |||||||||
Sbjct 161736 CAGAAAACACATCGCGTCAACGCCACTTTCTG 161767
>seq1302
Length=9750
Score = 86.0 bits (94), Expect = 2e-14
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
||||||| ||||||| | || || ||||||| || | ||||| ||||||||||
Sbjct 7262 TTCTTTCTTTACTGATTCTACTAAACCTATTCCCTTAACTATAGTTTCACTAGATAGTAA 7203
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
||||| | ||| ||||||| |||||| ||| || | ||||||||||| | | |
Sbjct 7202 ATAGGAATAGTAGGAATCTTATTAATCTATTTATAAATATTACTAATTAGATAATAAAGT 7143
Query 424 ATTTGGCTACCTTAA 438
|||| ||||||||||
Sbjct 7142 ATTTAGCTACCTTAA 7128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635169634336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |