Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq184 482 4e-134
seq656 268 2e-69
seq995 262 7e-68
seq932 250 5e-64
seq1074 237 3e-60
seq847 235 1e-59
seq760 235 1e-59
seq987 233 4e-59
seq923 232 1e-58
seq912 230 4e-58
seq970 221 2e-55
seq716 215 9e-54
seq487 205 2e-50
seq582 187 5e-45
seq1063 185 2e-44
seq446 179 7e-43
seq789 114 2e-23
>seq184
Length=11254
Score = 482 bits (534), Expect = 4e-134
Identities = 296/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct 4081 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGCCGGGGA 4140
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 4141 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 4200
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4201 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 4260
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 4261 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 4320
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||
Sbjct 4321 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTTATCAG-GA 4379
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 4380 ACGAAAGTTAGGGG 4393
>seq656
Length=10319
Score = 268 bits (296), Expect = 2e-69
Identities = 246/310 (79%), Gaps = 1/310 (0%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
||||||| || ||||| |||| ||| | |||| | ||||||| ||| | | |||||
Sbjct 2352 GTCCGGCTAAGCTTTTCCCTCTGTGGAACTGCATACTCTTCACTAGGTATACTGGGGAAA 2411
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
| |||||||||||| ||||||||||| | || | ||| ||| | ||| |||||||||
Sbjct 2412 TAAGACTTTTACTTTAAAAAAATTAGAATACTCCAGGCAAACCTATACTCAAATACATTA 2471
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
|| ||||||||||||||||||| ||||||||| || ||||||||||| | |||
Sbjct 2472 ATATAGAATAATAGAATAGGACGTATAATTCTATTTTATTAGTTTCTAGGACTACTATAA 2531
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
| ||||||||||| ||| || || | |||||| |||||||||| ||||||||||| |||
Sbjct 2532 TAATTAATAGGGACAGTTGGAAGTATTAGTATTTAATTGTCAGAAGTGAAATTCTTAGAT 2591
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
|||||||| ||||||||||||||||| || || || ||| |||| ||| || || |||
Sbjct 2592 TTATTGAAAACTAACTACTGCGAAAGTATTTACTAAAGATATTTTTATTTATTAG-GAAT 2650
Query 307 GAAAGTTAGG 316
||||||||||
Sbjct 2651 GAAAGTTAGG 2660
>seq995
Length=9639
Score = 262 bits (290), Expect = 7e-68
Identities = 239/300 (80%), Gaps = 1/300 (0%)
Strand=Plus/Minus
Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76
|||||||| |||| ||| |||||| ||||||||||||||| ||||||| ||| ||||||
Sbjct 7125 GCCTTTCCCTCTGTGGAACCGCATACCCTTCACTGGGTGTACCGGGGAAACAGAACTTTT 7066
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136
||||| ||||||||||| | || | |||| ||| | ||| ||||||||||||| |||||
Sbjct 7065 ACTTTAAAAAAATTAGAATACTCCAGGCAGACCTATACTCAAATACATTAGCATAGAATA 7006
Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196
|||||||| || | |||||||||| || |||||||| ||| | |||| |||||||
Sbjct 7005 ATAGAATAAGATATATAGTTCTATTTTATTAGTTTCTAGAACCACTATAATAATTAATAA 6946
Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256
|||||||| | | | | |||| |||| ||||| ||||||||||| ||||||| || |
Sbjct 6945 GGATAGTCAGAAGCATTAATATTTAATTATCAGAAGTGAAATTCTTAAATTTATTAAAAA 6886
Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||||||| |||| || || || ||| |||| ||| ||||| || ||||||||||
Sbjct 6885 CTAACTACTATAAAAGTATTTACTAAAGATATTTTTATTTATCAG-AAATGAAAGTTAGG 6827
>seq932
Length=10792
Score = 250 bits (276), Expect = 5e-64
Identities = 236/300 (79%), Gaps = 1/300 (0%)
Strand=Plus/Plus
Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76
|||||||| |||| ||| | || ||||||||| || | | |||| ||| ||||||
Sbjct 2677 GCCTTTCCCTCTGTGGAACTATATACCCTTCACTAAGTATACTAGGGAAACAGAACTTTT 2736
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136
||||| ||||||||||| | | | |||||||| | || |||| ||||| || |||||
Sbjct 2737 ACTTTAAAAAAATTAGAATACTTCAGGCAGGCCTATACTTAAATATATTAGTATAGAATA 2796
Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196
||||||||| | || ||||||||| || |||||||||| | | |||| ||||||||
Sbjct 2797 ATAGAATAGAATATGTAATTCTATTTTATTAGTTTCTAGGATCACTATAATAATTAATAG 2856
Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256
||| |||| | | | |||||| |||| ||||||||||||||||| |||||||| ||||
Sbjct 2857 GGACAGTCAAGAATATTAGTATTTAATTATCAGAGGTGAAATTCTTAGATTTATTAAAGA 2916
Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||||||| ||||||| || || ||| ||||||| ||| || || ||| ||||||||||
Sbjct 2917 CTAACTACTACGAAAGCATTTACTAAGAATGTTTTTATTTATTAG-GAATGAAAGTTAGG 2975
>seq1074
Length=2757
Score = 237 bits (262), Expect = 3e-60
Identities = 240/311 (77%), Gaps = 1/311 (0%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
||||||| || ||||||| |||| ||| | || ||||||||| ||| | | |||
Sbjct 471 GTCCGGCTGGACCTTTCCCTCTGTGGAACTATATACCCTTCACTAGGTATACTAAGGAAA 412
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||||||||||||||| ||||||||||| | || | | | || | | || |||| ||||
Sbjct 411 CAGGACTTTTACTTTAAAAAAATTAGAATACTCTAGGTAAGCTTATACTTAAATATATTA 352
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
| || |||||||||||||||| | |||||||||| || ||||||| ||| | |||
Sbjct 351 GTATAGAATAATAGAATAGGATATATAGTTCTATTTTATTAGTTTCTAAGACTACTATAA 292
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
| ||||||||| ||||| || || |||||||| |||| | ||| ||||||||||| |||
Sbjct 291 TAATTAATAGGAATAGTTAGGAGTATCAGTATTTAATTATTAGAAGTGAAATTCTTAGAT 232
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||| || ||||||||||| ||||| || || ||| ||||||| ||| || || |||
Sbjct 231 TTATTAAAAACTAACTACTGTGAAAGTATTTACTAAGAATGTTTTTATTTATTAG-GAAT 173
Query 307 GAAAGTTAGGG 317
||| ||||||
Sbjct 172 AAAAATTAGGG 162
>seq847
Length=10884
Score = 235 bits (260), Expect = 1e-59
Identities = 240/312 (77%), Gaps = 1/312 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||| ||| |||| ||||| |||| ||| | ||| | ||| ||| || ||| ||||
Sbjct 2820 TGGTCTGGCTGGGCTTTTCCCTCTGTGGAACTACATACTCTTTACTAAGTATGCTAGGGA 2879
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||| ||||| ||| ||||||||||| || | | |||| || | || |||| ||
Sbjct 2880 AATAGGATTTTTATTTTAAAAAAATTAGAATGCTTCAGGCAGATCTATACTTAAATATAT 2939
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|| || |||||||| |||| | ||| |||||||||||||| |||||||||| || |
Sbjct 2940 TAATATAGAATAATAAAATAAAATGTGTGGTTCTATTTTGTTAGTTTCTAGGATCGTTAT 2999
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||| |||||||| || ||| || || | |||||| |||| ||||| ||||||||||| |
Sbjct 3000 AATAATTAATAGAGACAGTTAGGAGTATTAGTATTTAATTATCAGAAGTGAAATTCTTAG 3059
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||| || |||||||||| |||||| || || |||||| |||| ||| || || ||
Sbjct 3060 ATTTATTAAAAACTAACTACTACGAAAGTATTTACTAAGGATATTTTTATTTATTAG-GA 3118
Query 305 ACGAAAGTTAGG 316
| ||||||||||
Sbjct 3119 ATGAAAGTTAGG 3130
>seq760
Length=10588
Score = 235 bits (260), Expect = 1e-59
Identities = 231/297 (78%), Gaps = 1/297 (0%)
Strand=Plus/Minus
Query 20 TTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACT 79
||||| |||| ||| | | || | ||| ||| ||| | | ||||| || ||||||| |
Sbjct 7979 TTTCCCTCTGTGGAACTGTATACTCTTTACTAGGTATACTGGGGAAATAGAACTTTTATT 7920
Query 80 TTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATA 139
|| ||||||||||| || || | |||| || | | |||| ||||| || ||||||||
Sbjct 7919 TTAAAAAAATTAGAATGCTCCAGGCAGATCTATATTTAAATATATTAGTATAGAATAATA 7860
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
|||||||| || |||||||||||| |||| ||||| | |||| |||||||||||
Sbjct 7859 GAATAGGATATGTAATTCTATTTTGTTAGTTTTTAGGATTACTATAATAATTAATAGGGA 7800
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
|||| ||||| | |||||| |||| | ||||||||||||||| |||||||| || ||||
Sbjct 7799 TAGTTAGGGGTATTAGTATTTAATTATTAGAGGTGAAATTCTTAGATTTATTAAAAACTA 7740
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||||||||||| || || || ||| |||| ||| || || ||| ||||||||||
Sbjct 7739 ACTACTGCGAAAGTATTTACTAAAGATATTTTTATTTATTAG-GAATGAAAGTTAGG 7684
>seq987
Length=10416
Score = 233 bits (258), Expect = 4e-59
Identities = 239/311 (77%), Gaps = 1/311 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||| ||| || ||||||| |||| ||| | |||| ||||||||| ||| | || ||
Sbjct 2593 TGGTCTGGCTGGACCTTTCCCTCTGTGGAACTGCATACCCTTCACTAGGTATACCAAAGA 2652
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||| ||||||||||| ||||||||||| | | | | || || | | |||| ||
Sbjct 2653 AACAGAACTTTTACTTTAAAAAAATTAGAATACTTTAGGTAGATCTATATTTAAATATAT 2712
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||| || |||||||| ||||||| || ||||||||| || |||||||||||||| |
Sbjct 2713 TAGTATAGAATAATAAAATAGGATGTATAATTCTATTTTATTAGTTTCTAGGACCGCTAT 2772
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||| ||||||||||||||| | || | | |||| |||| ||||| ||||||||||| |
Sbjct 2773 AATAATTAATAGGGATAGTTAAGAGTATTAATATTTAATTATCAGAAGTGAAATTCTTAG 2832
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||| ||||||||||||| | |||| || || || ||| |||| ||| || || ||
Sbjct 2833 ATTTATTAAAGACTAACTACTACAAAAGTATTTACTAAAGATATTTTTATTTATTAG-GA 2891
Query 305 ACGAAAGTTAG 315
| |||| ||||
Sbjct 2892 ATGAAAATTAG 2902
>seq923
Length=10141
Score = 232 bits (256), Expect = 1e-58
Identities = 238/310 (77%), Gaps = 1/310 (0%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66
|||| ||||| ||||||| ||| || | || ||||||||| || | | || ||
Sbjct 7855 GTCCAGCCGGACCTTTCCCTCTATAGAACTATATACCCTTCACTAAGTATACTGGAGAAA 7796
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126
||| ||||||||||| ||||||||||| || || | |||||| | | ||| |||| ||||
Sbjct 7795 CAGAACTTTTACTTTAAAAAAATTAGAATGCTCCAGGCAGGCTTATACTCAAATATATTA 7736
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186
| || |||||||||||||||| | ||||||||| || |||||||||||| |||
Sbjct 7735 GTATAGAATAATAGAATAGGATATATAATTCTATTTTATTAATTTCTAGGACCGTTATAA 7676
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
| ||||||||| ||| | || || | | |||| |||| | ||||||||||||||| ||
Sbjct 7675 TAATTAATAGGAATAATTAGGAGTATTAATATTTAATTATTAGAGGTGAAATTCTTAAAT 7616
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
||||| || ||||||||||| |||| || || |||||| |||||||| || || |||
Sbjct 7615 TTATTAAAAACTAACTACTGTAAAAGTATTTACTAAGGATATTTTCATTTATTAG-GAAT 7557
Query 307 GAAAGTTAGG 316
|||||||||
Sbjct 7556 AAAAGTTAGG 7547
>seq912
Length=10659
Score = 230 bits (254), Expect = 4e-58
Identities = 231/299 (77%), Gaps = 1/299 (0%)
Strand=Plus/Minus
Query 18 CCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTA 77
||||||| |||| ||| | | || | ||| ||| || | | | || || |||||||
Sbjct 8052 CCTTTCCCTCTGTGGAACTGTATACTCTTTACTAAGTATACTAGAGAAATAGAACTTTTA 7993
Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137
|||| ||||||||||| | || | |||||||| | || |||| ||||| || ||||||
Sbjct 7992 CTTTAAAAAAATTAGAATACTCCAGGCAGGCCTATACTTAAATATATTAGTATAGAATAA 7933
Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197
|| ||||||| | ||||||||| || |||||||||||||| |||| |||||||||
Sbjct 7932 TAAAATAGGATATATAATTCTATTTTATTAGTTTCTAGGACCGCTATAATAATTAATAGG 7873
Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257
|| |||| || | ||||||||||||| ||||| ||||||||||| |||||||| || ||
Sbjct 7872 GACAGTCAGGAGCATCAGTATTCAATTATCAGAAGTGAAATTCTTAGATTTATTAAAAAC 7813
Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
|||||| | ||||| || || || ||| |||| ||| ||||| ||| |||||||||
Sbjct 7812 TAACTATTATGAAAGTATTTACTAAAGATATTTTTATTTATCAG-GAATAAAAGTTAGG 7755
>seq970
Length=9507
Score = 221 bits (244), Expect = 2e-55
Identities = 199/249 (80%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127
|| ||||||||||| ||||||||||| | || || || | | | || ||||||||||
Sbjct 7133 AGAACTTTTACTTTAAAAAAATTAGAATACTCCAAACAAACTTATACTTAAATACATTAG 7074
Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187
|| |||||||| ||||||| | ||||||||| || ||||||||||||||| ||||
Sbjct 7073 TATAGAATAATAAAATAGGATATATAATTCTATTTTATTAGTTTCTAGGACCGCCATAAT 7014
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
||||||||||| ||| | | |||||||| |||| ||||| ||||||||||| |||
Sbjct 7013 AATTAATAGGGACAGTTAGAAGCATCAGTATTTAATTATCAGAAGTGAAATTCTTAAATT 6954
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||| || |||||||||| | |||| || ||||||||| |||||||| || || |||||
Sbjct 6953 TATTAAAAACTAACTACTACAAAAGTATTTACCAAGGATATTTTCATTTATTAG-GAACG 6895
Query 308 AAAGTTAGG 316
|||||||||
Sbjct 6894 AAAGTTAGG 6886
>seq716
Length=10799
Score = 215 bits (238), Expect = 9e-54
Identities = 228/299 (76%), Gaps = 1/299 (0%)
Strand=Plus/Minus
Query 18 CCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTA 77
||||||| ||| || | || ||||||||| || | || | | ||| |||||||
Sbjct 8232 CCTTTCCCTCTATAGAACTATATACCCTTCACTAAGTATACCAAGAAAACAGAACTTTTA 8173
Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137
|||| ||||||||||| | || |||||||||| | || |||||||||| || ||||||
Sbjct 8172 CTTTAAAAAAATTAGAATACTCCAAGCAGGCCTATACTTAAATACATTAGTATAGAATAA 8113
Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197
||||||| || | ||||||||| || |||||||||||| | |||| |||||||||
Sbjct 8112 TAGAATAAGATATATAATTCTATTTTATTAGTTTCTAGGACCACTATAATAATTAATAGG 8053
Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257
|||| | | | |||||||| |||| ||||| ||||||||||| |||||||| || ||
Sbjct 8052 GATAATTAGAAATATCAGTATTTAATTATCAGAAGTGAAATTCTTAGATTTATTAAAAAC 7993
Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||| || |||| || || |||||| |||| ||| || || ||||||| |||||
Sbjct 7992 TAACTGCTATAAAAGTATTTACTAAGGATATTTTTATTTATTAG-AAACGAAAATTAGG 7935
>seq487
Length=11137
Score = 205 bits (226), Expect = 2e-50
Identities = 226/300 (75%), Gaps = 1/300 (0%)
Strand=Plus/Minus
Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76
|| ||||| |||| ||| | || | ||||||| | | | | || || ||||||
Sbjct 7820 GCTTTTCCCTCTGTGGAACTATATACTCTTCACTAGATATACTAAAGAAATAGAACTTTT 7761
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136
||||| ||||||||||| | || | | | |||| | ||| |||| |||| || ||||
Sbjct 7760 ACTTTAAAAAAATTAGAATACTCCAGGTAAGCCTATACTCAAATATATTAATATAAAATA 7701
Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196
||||||||||| | ||||||||| || |||||||| ||| || |||| ||||||||
Sbjct 7700 ATAGAATAGGATATATAATTCTATTTTATTAGTTTCTAGAACCACCATAATAATTAATAG 7641
Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256
|| ||| | ||| | | |||| |||| ||||| ||||||||||| |||||||| || |
Sbjct 7640 AGACAGTTAGAGGTATTAATATTTAATTATCAGAAGTGAAATTCTTAGATTTATTAAAAA 7581
Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||||||| |||||| || || |||||| |||||||| ||||| ||| ||| |||||
Sbjct 7580 CTAACTACTACGAAAGTATTTACTAAGGATATTTTCATTTATCAG-GAATAAAAATTAGG 7522
>seq582
Length=10944
Score = 187 bits (206), Expect = 5e-45
Identities = 222/300 (74%), Gaps = 1/300 (0%)
Strand=Plus/Plus
Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76
|| ||||| ||| || | ||| ||||||||| | | | || | || ||| ||||||
Sbjct 2683 GCTTTTCCCTCTATAGAACTACATACCCTTCACTAGATATACCAGAGAAACAGAACTTTT 2742
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136
||||| ||||||||| | | || | | ||| | ||| |||| |||| ||| ||||
Sbjct 2743 ACTTTAAAAAAATTAAAATACTCCAGATAAACCTATACTCAAATATATTAACATAAAATA 2802
Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196
||| |||| || | ||||||||| || |||||||| ||| | |||| ||||||||
Sbjct 2803 ATAAAATAAGATATATAATTCTATTTTATTAGTTTCTAGAACCACTATAATAATTAATAG 2862
Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256
|| |||| || || |||||||| |||| ||||| | |||||||| ||||||| || |
Sbjct 2863 AGACAGTCAGGAGTATCAGTATTTAATTATCAGAAATAAAATTCTTAAATTTATTAAAAA 2922
Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
||||||||| |||||| || ||||| || |||||||| ||||| ||| | | |||||
Sbjct 2923 CTAACTACTACGAAAGTATTTACCAAAAATATTTTCATTTATCAG-AAACAACAATTAGG 2981
>seq1063
Length=10287
Score = 185 bits (204), Expect = 2e-44
Identities = 221/299 (74%), Gaps = 1/299 (0%)
Strand=Plus/Plus
Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76
|| |||||||||| ||| | || | || |||| | | | ||||| || | ||||
Sbjct 2605 GCTTTTCCTTCTGTGGAACTATATACTCTCCACTAAATATACTGGGGAAATAGAATTTTT 2664
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136
||||| |||| |||||| | || | | || | | | | |||| ||||| || |||||
Sbjct 2665 ACTTTAAAAAGATTAGAATATTTTAGGTAGACTTATATTTAAATATATTAGTATAGAATA 2724
Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196
||| ||||||| | |||||||||| || |||||||||| | |||| ||||||||
Sbjct 2725 ATAAAATAGGATATATAGTTCTATTTTATTAGTTTCTAGGATTGTTATAATAATTAATAG 2784
Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256
||||||| || || | |||||| |||| | ||| ||||||||||| |||||||| || |
Sbjct 2785 GGATAGTTAGGAGTATTAGTATTTAATTATTAGAAGTGAAATTCTTAGATTTATTAAAAA 2844
Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315
||||||||| |||| || || || ||| |||| ||| || || ||||||||||||
Sbjct 2845 CTAACTACTATAAAAGTATTTACTAAAGATATTTTTATTTATTAG-AAACGAAAGTTAG 2902
>seq446
Length=10807
Score = 179 bits (198), Expect = 7e-43
Identities = 220/299 (74%), Gaps = 1/299 (0%)
Strand=Plus/Plus
Query 18 CCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTA 77
||||||| ||| || | | || | ||||||| ||| | | | ||| ||||||||||
Sbjct 2724 CCTTTCCCTCTATAGAACTGTATACTCTTCACTAGGTATACTGAGGAAATAGGACTTTTA 2783
Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137
||| ||||||||||| | | | | | || | | || |||| |||| || ||||||
Sbjct 2784 TTTTAAAAAAATTAGAATACTTCAGGTAAGCTTATACTTAAATATATTAATATAGAATAA 2843
Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197
|||||||| | | ||||||||| || |||||||||| | |||| |||||||||
Sbjct 2844 TAGAATAGAATATATAATTCTATTTTATTAGTTTCTAGGATCATTATAATAATTAATAGG 2903
Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257
|||||| || || | |||||| |||||| ||||||||||||||| |||||||| || ||
Sbjct 2904 GATAGTTGGAAGTATTAGTATTTAATTGTTAGAGGTGAAATTCTTAGATTTATTAAAAAC 2963
Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
|||||| | ||| || | |||||| |||| ||| || || ||| ||| |||||
Sbjct 2964 TAACTATTATAAAAATATTTATTAAGGATATTTTTATTTATTAG-GAATAAAAATTAGG 3021
>seq789
Length=120845
Score = 114 bits (126), Expect = 2e-23
Identities = 172/243 (71%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
|||||||| ||||||||| | | | | | || | | | | |||| |||| || ||
Sbjct 110757 TTTACTTTAAAAAAATTAAAATACTTCAGGTAGACTTATATTTAAATATGTTAGTATAGA 110816
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||||||||||| | | ||||||||| || |||||||| | | |||| |||||
Sbjct 110817 ATAATAGAATAGAATATATAATTCTATTTTATTAGTTTCTAGAATTACTATAATAATTAA 110876
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||| ||||| || | | |||||| |||| | |||| | |||||||| ||||||| |
Sbjct 110877 TAGGAATAGTTAGGAATATTAGTATTTAATTATAAGAGATAAAATTCTTAAATTTATTAA 110936
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
| ||||||| |||| || || |||||| |||| || || || || ||||||
Sbjct 110937 AAGCTAACTATGATAAAAGTATTTACTAAGGATATTTTTCTTTATTAG-AAATAAAAGTT 110995
Query 314 AGG 316
|||
Sbjct 110996 AGG 110998
Score = 80.6 bits (88), Expect = 5e-13
Identities = 106/147 (72%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
|| |||||| || |||||||| | |||| ||| ||||| |||| || | | |
Sbjct 80731 TTTTATTTTATTAGTTTCTAGAATTATTATAATAATTGATAGGAATAGCTAGGAATATTA 80790
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
|||| |||| | | | |||||||||| ||||||||||| ||||||||||| |||
Sbjct 80791 ATATTTAATTATTAAAAATGAAATTCTTAGATTTATTGAAAACTAACTACTGTAAAAATA 80850
Query 275 TTCACCAAGGATGTTTTCATTAATCAG 301
|| || || ||| |||| ||| || ||
Sbjct 80851 TTTACTAAAGATATTTTTATTTATTAG 80877
Score = 77.0 bits (84), Expect = 6e-12
Identities = 182/274 (66%), Gaps = 1/274 (0%)
Strand=Plus/Plus
Query 43 CCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAA 102
|||||||| | | | ||||| || ||||||||||| || | |||||| | || |
Sbjct 96734 CCTTCACTAAATATACTGGGGAAATAGAACTTTTACTTTAAAGATATTAGAATATTTTAG 96793
Query 103 GCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTT 162
| | || | | || |||| ||| || || |||| ||||| | | ||||| ||
Sbjct 96794 GTAAGCTTATACTTAAATATCTTAATATAAAAGAATAAAATAGAATTTATAATTCTACTT 96853
Query 163 TGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222
| || |||||||| ||| | ||| ||| |||| ||| | | | | | |||| ||
Sbjct 96854 TATTAGTTTCTAGAACCACTATAACAATTCATAGAAATAATTAGAAATATTAATATTTAA 96913
Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282
|| | | || | |||| || ||||||| || |||||||||| ||| || || ||
Sbjct 96914 TTATTAAAGATAAAATCTTTATATTTATTAAAAACTAACTACTATAGAAGTATTTACTAA 96973
Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGG 316
| | |||| ||| || || || ||||||||
Sbjct 96974 GATTATTTTTATTTATTAG-AAATAGAAGTTAGG 97006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915188322048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |