Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq184 269 3e-70 seq656 147 2e-33 seq912 145 8e-33 seq716 140 3e-31 seq995 138 1e-30 seq932 134 1e-29 seq1074 129 6e-28 seq760 129 6e-28 seq923 127 2e-27 seq847 125 7e-27 seq970 123 3e-26 seq987 118 1e-24 seq487 118 1e-24 seq446 116 4e-24 seq1063 102 8e-20 seq582 100 3e-19 >seq184 Length=11254 Score = 269 bits (298), Expect = 3e-70 Identities = 175/191 (92%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 4138 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 4197 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 4198 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 4256 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 4257 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 4316 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 4317 TTGGATTTATT 4327 >seq656 Length=10319 Score = 147 bits (162), Expect = 2e-33 Identities = 148/191 (77%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| | |||||||||||| ||||||||||| || | ||| ||| | ||| |||| Sbjct 2407 GGAAATAAGACTTTTACTTTAAAAAAATTAGAATACTCCAGGCAAACCTATACTCAAATA 2466 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| || ||||||||||||||||||| ||||||||| | |||||||||| | Sbjct 2467 CATTAATATAGAATAATAGAATAGGACGTATAATTCTATTTTATTAGTTTCTAGGA-CTA 2525 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||| ||| || || | |||||| |||||||| | ||||||||| Sbjct 2526 CTATAATAATTAATAGGGACAGTTGGAAGTATTAGTATTTAATTGTCAGAAGTGAAATTC 2585 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 2586 TTAGATTTATT 2596 >seq912 Length=10659 Score = 145 bits (160), Expect = 8e-33 Identities = 144/185 (78%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||||| || | |||||||| | || |||| |||| Sbjct 8002 AGAACTTTTACTTTAAAAAAATTAGAATACTCCAGGCAGGCCTATACTTAAATATATTAG 7943 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 || |||||||| ||||||| | ||||||||| | ||||||||||||| | ||| Sbjct 7942 TATAGAATAATAAAATAGGATATATAATTCTATTTTATTAGTTTCTAGGACCG-CTATAA 7884 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | || |||| ||| |||| || | ||||||||||||| ||| | ||||||||||| ||| Sbjct 7883 TAATTAATAGGGACAGTCAGGAGCATCAGTATTCAATTATCAGAAGTGAAATTCTTAGAT 7824 Query 187 TTATT 191 ||||| Sbjct 7823 TTATT 7819 >seq716 Length=10799 Score = 140 bits (154), Expect = 3e-31 Identities = 145/189 (77%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 || ||| ||||||||||| ||||||||||| || |||||||||| | || |||||| Sbjct 8186 AAACAGAACTTTTACTTTAAAAAAATTAGAATACTCCAAGCAGGCCTATACTTAAATACA 8127 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| || ||||||||||||| || | ||||||||| | |||||||||||| | Sbjct 8126 TTAGTATAGAATAATAGAATAAGATATATAATTCTATTTTATTAGTTTCTAGGACC-ACT 8068 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||| || |||| ||||| | | | |||||||| |||| ||| | ||||||||||| Sbjct 8067 ATAATAATTAATAGGGATAATTAGAAATATCAGTATTTAATTATCAGAAGTGAAATTCTT 8008 Query 183 GGATTTATT 191 |||||||| Sbjct 8007 AGATTTATT 7999 >seq995 Length=9639 Score = 138 bits (152), Expect = 1e-30 Identities = 146/191 (76%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||| ||||||||||| ||||||||||| || | |||| ||| | ||| |||| Sbjct 7080 GGAAACAGAACTTTTACTTTAAAAAAATTAGAATACTCCAGGCAGACCTATACTCAAATA 7021 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||| ||||||||||||| || | |||||||||| | |||||||| ||| Sbjct 7020 CATTAGCATAGAATAATAGAATAAGATATATAGTTCTATTTTATTAGTTTCTAGAACC-A 6962 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| |||||||| | | | | |||| |||| ||| | ||||||||| Sbjct 6961 CTATAATAATTAATAAGGATAGTCAGAAGCATTAATATTTAATTATCAGAAGTGAAATTC 6902 Query 181 TTGGATTTATT 191 || ||||||| Sbjct 6901 TTAAATTTATT 6891 >seq932 Length=10792 Score = 134 bits (148), Expect = 1e-29 Identities = 145/191 (76%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||| ||||||||||| ||||||||||| | | |||||||| | || |||| Sbjct 2722 GGAAACAGAACTTTTACTTTAAAAAAATTAGAATACTTCAGGCAGGCCTATACTTAAATA 2781 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||||||||| | || ||||||||| | |||||||||| | Sbjct 2782 TATTAGTATAGAATAATAGAATAGAATATGTAATTCTATTTTATTAGTTTCTAGGATC-A 2840 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||| |||| | | | |||||| |||| ||| ||||||||||| Sbjct 2841 CTATAATAATTAATAGGGACAGTCAAGAATATTAGTATTTAATTATCAGAGGTGAAATTC 2900 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 2901 TTAGATTTATT 2911 >seq1074 Length=2757 Score = 129 bits (142), Expect = 6e-28 Identities = 144/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||||||||||||||| ||||||||||| || | | | || | | || |||| Sbjct 416 GGAAACAGGACTTTTACTTTAAAAAAATTAGAATACTCTAGGTAAGCTTATACTTAAATA 357 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||||||||||| | |||||||||| | ||||||| || | Sbjct 356 TATTAGTATAGAATAATAGAATAGGATATATAGTTCTATTTTATTAGTTTCTAAGA-CTA 298 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| | ||||| || || |||||||| |||| | | | ||||||||| Sbjct 297 CTATAATAATTAATAGGAATAGTTAGGAGTATCAGTATTTAATTATTAGAAGTGAAATTC 238 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 237 TTAGATTTATT 227 >seq760 Length=10588 Score = 129 bits (142), Expect = 6e-28 Identities = 144/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| || ||||||| ||| ||||||||||| | || | |||| || | | |||| Sbjct 7937 GGAAATAGAACTTTTATTTTAAAAAAATTAGAATGCTCCAGGCAGATCTATATTTAAATA 7878 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||||||||||| || ||||||||||| |||| ||||| Sbjct 7877 TATTAGTATAGAATAATAGAATAGGATATGTAATTCTATTTTGTTAGTTTTTAGGA-TTA 7819 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||| || |||| ||||||| ||||| | |||||| |||| | | ||||||||||| Sbjct 7818 CTATAATAATTAATAGGGATAGTTAGGGGTATTAGTATTTAATTATTAGAGGTGAAATTC 7759 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 7758 TTAGATTTATT 7748 >seq923 Length=10141 Score = 127 bits (140), Expect = 2e-27 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 ||| ||| ||||||||||| ||||||||||| | || | |||||| | | ||| |||| Sbjct 7799 GAAACAGAACTTTTACTTTAAAAAAATTAGAATGCTCCAGGCAGGCTTATACTCAAATAT 7740 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| || |||||||||||||||| | ||||||||| | |||||||||||| Sbjct 7739 ATTAGTATAGAATAATAGAATAGGATATATAATTCTATTTTATTAATTTCTAGGACCG-T 7681 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||| || |||| | ||| | || || | | |||| |||| | | |||||||||||| Sbjct 7680 TATAATAATTAATAGGAATAATTAGGAGTATTAATATTTAATTATTAGAGGTGAAATTCT 7621 Query 182 TGGATTTATT 191 | ||||||| Sbjct 7620 TAAATTTATT 7611 >seq847 Length=10884 Score = 125 bits (138), Expect = 7e-27 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||| ||||| ||| ||||||||||| | | | |||| || | || |||| Sbjct 2877 GGAAATAGGATTTTTATTTTAAAAAAATTAGAATGCTTCAGGCAGATCTATACTTAAATA 2936 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||| |||| | ||| ||||||||||||| |||||||||| || Sbjct 2937 TATTAATATAGAATAATAAAATAAAATGTGTGGTTCTATTTTGTTAGTTTCTAGGATCG- 2995 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||| || |||| || ||| || || | |||||| |||| ||| | ||||||||| Sbjct 2996 TTATAATAATTAATAGAGACAGTTAGGAGTATTAGTATTTAATTATCAGAAGTGAAATTC 3055 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 3056 TTAGATTTATT 3066 >seq970 Length=9507 Score = 123 bits (136), Expect = 3e-26 Identities = 139/185 (75%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||||| || || || | | | || ||||||||| Sbjct 7133 AGAACTTTTACTTTAAAAAAATTAGAATACTCCAAACAAACTTATACTTAAATACATTAG 7074 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 || |||||||| ||||||| | ||||||||| | ||||||||||||| || ||| Sbjct 7073 TATAGAATAATAAAATAGGATATATAATTCTATTTTATTAGTTTCTAGGACCG-CCATAA 7015 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | || |||| ||| ||| | | |||||||| |||| ||| | ||||||||||| || Sbjct 7014 TAATTAATAGGGACAGTTAGAAGCATCAGTATTTAATTATCAGAAGTGAAATTCTTAAAT 6955 Query 187 TTATT 191 ||||| Sbjct 6954 TTATT 6950 >seq987 Length=10416 Score = 118 bits (130), Expect = 1e-24 Identities = 141/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 ||| ||| ||||||||||| ||||||||||| | | | || || | | |||| Sbjct 2651 GAAACAGAACTTTTACTTTAAAAAAATTAGAATACTTTAGGTAGATCTATATTTAAATAT 2710 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| || |||||||| ||||||| || ||||||||| | ||||||||||||| | Sbjct 2711 ATTAGTATAGAATAATAAAATAGGATGTATAATTCTATTTTATTAGTTTCTAGGACCG-C 2769 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||| || |||| ||||||| | || | | |||| |||| ||| | |||||||||| Sbjct 2770 TATAATAATTAATAGGGATAGTTAAGAGTATTAATATTTAATTATCAGAAGTGAAATTCT 2829 Query 182 TGGATTTATT 191 | |||||||| Sbjct 2830 TAGATTTATT 2839 >seq487 Length=11137 Score = 118 bits (130), Expect = 1e-24 Identities = 138/185 (75%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||||| || | | | |||| | ||| |||| |||| Sbjct 7769 AGAACTTTTACTTTAAAAAAATTAGAATACTCCAGGTAAGCCTATACTCAAATATATTAA 7710 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 || ||||||||||||||| | ||||||||| | |||||||| ||| || ||| Sbjct 7709 TATAAAATAATAGAATAGGATATATAATTCTATTTTATTAGTTTCTAGAACC-ACCATAA 7651 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | || |||| || ||| | ||| | | |||| |||| ||| | ||||||||||| ||| Sbjct 7650 TAATTAATAGAGACAGTTAGAGGTATTAATATTTAATTATCAGAAGTGAAATTCTTAGAT 7591 Query 187 TTATT 191 ||||| Sbjct 7590 TTATT 7586 >seq446 Length=10807 Score = 116 bits (128), Expect = 4e-24 Identities = 141/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||| ||| ||||||||||| | | | | || | | || |||| Sbjct 2768 GGAAATAGGACTTTTATTTTAAAAAAATTAGAATACTTCAGGTAAGCTTATACTTAAATA 2827 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||||||||| | | ||||||||| | |||||||||| | Sbjct 2828 TATTAATATAGAATAATAGAATAGAATATATAATTCTATTTTATTAGTTTCTAGGATCAT 2887 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||| || |||| ||||||| || || | |||||| |||||| | ||||||||||| Sbjct 2888 TA-TAATAATTAATAGGGATAGTTGGAAGTATTAGTATTTAATTGTTAGAGGTGAAATTC 2946 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 2947 TTAGATTTATT 2957 >seq1063 Length=10287 Score = 102 bits (112), Expect = 8e-20 Identities = 138/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| || | ||||||||| |||| |||||| || | | || | | | | |||| Sbjct 2650 GGAAATAGAATTTTTACTTTAAAAAGATTAGAATATTTTAGGTAGACTTATATTTAAATA 2709 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| || |||||||| ||||||| | |||||||||| | |||||||||| | Sbjct 2710 TATTAGTATAGAATAATAAAATAGGATATATAGTTCTATTTTATTAGTTTCTAGGATTGT 2769 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||| || |||| ||||||| || || | |||||| |||| | | | ||||||||| Sbjct 2770 TA-TAATAATTAATAGGGATAGTTAGGAGTATTAGTATTTAATTATTAGAAGTGAAATTC 2828 Query 181 TTGGATTTATT 191 || |||||||| Sbjct 2829 TTAGATTTATT 2839 >seq582 Length=10944 Score = 100 bits (110), Expect = 3e-19 Identities = 137/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 ||| ||| ||||||||||| ||||||||| | || | | ||| | ||| |||| Sbjct 2729 GAAACAGAACTTTTACTTTAAAAAAATTAAAATACTCCAGATAAACCTATACTCAAATAT 2788 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||| ||||||| |||| || | ||||||||| | |||||||| ||| | Sbjct 2789 ATTAACATAAAATAATAAAATAAGATATATAATTCTATTTTATTAGTTTCTAGAACC-AC 2847 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||| || |||| || |||| || || |||||||| |||| ||| | | ||||||| Sbjct 2848 TATAATAATTAATAGAGACAGTCAGGAGTATCAGTATTTAATTATCAGAAATAAAATTCT 2907 Query 182 TGGATTTATT 191 | ||||||| Sbjct 2908 TAAATTTATT 2917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993671040