Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq35 87.8 7e-12 >seq35 Length=365667 Score = 87.8 bits (96), Expect = 7e-12 Identities = 130/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 351090 CGTGGCCGTTGGTCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGT 351149 ||||| ||| ||||||| || || || || |||||||||||| ||||| ||| ||| Sbjct 293644 CGTGGAGGTTCATCTCGTCACCATCGAAATCAGCGTTGTAGGGCGACGTGACGGACAGGT 293585 Query 351150 TGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGT 351209 ||| | || |||| || | || | ||| || | ||| |||| |||||| | | Sbjct 293584 TGAGACGGAAGGTGGAGTACGGCATGACGCG---AACTCTGTGACCCATCATGGACTCCT 293528 Query 351210 TGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCA 351269 |||| |||| ||||| || ||| ||||||| ||||||| | || ||| | ||| | Sbjct 293527 TGTGCAGCGACGGCTGACGGTTGAAGATGATGTAGTCGCCAGTGATCAGGTGGCGCTCAA 293468 Query 351270 CCTT 351273 |||| Sbjct 293467 CCTT 293464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084704285830248