Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq35 87.8 7e-12
>seq35
Length=365667
Score = 87.8 bits (96), Expect = 7e-12
Identities = 130/184 (71%), Gaps = 3/184 (2%)
Strand=Plus/Minus
Query 351090 CGTGGCCGTTGGTCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGT 351149
||||| ||| ||||||| || || || || |||||||||||| ||||| ||| |||
Sbjct 293644 CGTGGAGGTTCATCTCGTCACCATCGAAATCAGCGTTGTAGGGCGACGTGACGGACAGGT 293585
Query 351150 TGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGT 351209
||| | || |||| || | || | ||| || | ||| |||| |||||| | |
Sbjct 293584 TGAGACGGAAGGTGGAGTACGGCATGACGCG---AACTCTGTGACCCATCATGGACTCCT 293528
Query 351210 TGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCA 351269
|||| |||| ||||| || ||| ||||||| ||||||| | || ||| | ||| |
Sbjct 293527 TGTGCAGCGACGGCTGACGGTTGAAGATGATGTAGTCGCCAGTGATCAGGTGGCGCTCAA 293468
Query 351270 CCTT 351273
||||
Sbjct 293467 CCTT 293464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084704285830248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |