Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq458 86.0 2e-11 >seq458 Length=245255 Score = 86.0 bits (94), Expect = 2e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| ||||| ||||||| | | || ||||||||||| || ||| || || | Sbjct 224349 CAATGGTCATGCGAGATGGAATGGCGTGGGGATTGATGATGATATCCGGCGTGATACCTT 224290 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||| || ||||||||||| || || | | |||||| ||||| || || ||| Sbjct 224289 CGCAGGTGAACGGCATATCTTCTTGACGATATGTTACACCAATTGTTCCTTTCTGACCAT 224230 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || |||||||| || ||||| Sbjct 224229 GACGTGATGCAAACTTATCACCAAT 224205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884855584463468