Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq115 708 0.0
>seq115
Length=31501
Score = 708 bits (784), Expect = 0.0
Identities = 561/665 (84%), Gaps = 14/665 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct 28274 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 28333
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28334 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 28393
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct 28394 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGCACGTGAAATTGTTAAAAGGGAAGCGCTT 28453
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | || ||| || || | | |||| || ||| |||| |||
Sbjct 28454 GTGACCAGACTTGCGTCCGGTGAATCACCCAGCTCTCGCGGCTGGGGCA--CTTCGCCGG 28511
Query 262 -TCAGGCCAGCATCAGCT--CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|||||||||||||||| | | ||| ||| ||| || | |||| ||||| || ||
Sbjct 28512 CACAGGCCAGCATCAGCTTGCCGTCGG--GGACAAAAGCTTCAGGAACGTGGCTCCTCTC 28569
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| ||||||||||| | | ||| | || | || ||||||| |||||||| ||
Sbjct 28570 GGGGAGTGTTATAGCCTGTTGCATAATACCCTTCGGC-GGGCTGAGGTACGCGCTCC-GC 28627
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 28628 AAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCAAC 28687
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| | | ||||||||||||||||| |||||| | ||||||||||||||||||| ||||| |
Sbjct 28688 CTTATGTGCGAGTGTTTGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 28747
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 28748 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 28803
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | | |||||||||||| |||||||||||| || |||||||||||||||||||||
Sbjct 28804 ATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTATAGGGTGAAGCCAGAGGAAA 28863
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| || | || ||
Sbjct 28864 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGCGCATGGG 28923
Query 679 GGCGA 683
|||||
Sbjct 28924 GGCGA 28928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079993114550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |