Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq317 96.9 1e-17 >seq317 Length=194037 Score = 96.9 bits (106), Expect = 1e-17 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 14032 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 14091 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAA-GTTGTTCTCAGTTC-----GGATT 419 | |||||| |||| | ||| |||| || ||| | | | | | || ||||| Sbjct 14092 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAGAGGATATAAATTATACAAGGATT 14151 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| || ||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 14152 GTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 14211 Query 480 CGGTGAAT 487 |||||||| Sbjct 14212 CGGTGAAT 14219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503995172160