Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq49 367 1e-96
seq179 178 1e-39
>seq49
Length=112291
Score = 367 bits (406), Expect = 1e-96
Identities = 1221/1880 (65%), Gaps = 52/1880 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | | ||| |||| ||| | || ||||||||||| |||
Sbjct 49592 TCGACGGTGAACTGAATGGGGGCCGAAGCTGCCTGGGTACGCAGGTAGTACATGCCCGTC 49651
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| || || ||||| | || ||||||||| | | || ||
Sbjct 49652 TTGAGACCAAGCTTCCAGCCAGCAAAGTGCAT-GCTGGTAATTTTGCCCATGGTAGGATC 49710
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||||| ||| |||||| | ||| || || ||||||||
Sbjct 49711 CTTCATGTGGATGTTGAGGGACTGTGACTGGTCGATGAAGGCACCGCGGTCGGCAGCCAT 49770
Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTC 65313
| ||| | |||| | || || |||||||||||||||||||| ||||||
Sbjct 49771 CTGCACAACGGTACGCTGG---GAGATTTCCCAGACGGTCTTGTACAGAGCCTTTACCTC 49827
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
||||| | |||| |||||| ||||| || || || || || |||
Sbjct 49828 GGCAGGAATGTTGGGGATGTTCTGGACGGAACCGTTCTCGGCGATGATACGGTTCTTCAT 49887
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433
| || |||||||| |||| |||| |||| || | || | |||| ||||||
Sbjct 49888 GGCATCAGACCACAAGCCCATGTCGACGAGATCTTTCAACAGCCAGGGGTTGACGACTTG 49947
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
|||||| || | || |||||||| || ||||||||||| |||||| ||| | ||
Sbjct 49948 GAACTCTCCAGCAAGAACACGACGCTGGTAAATGTTGGACGTATAGGGTTCGAAGCACTC 50007
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
||||||| | ||| || | ||| || ||||| ||||||||||| || | || |||
Sbjct 50008 GTTGTTGCCCAAAATCTGCGAAGTGGAGGCAGTAGGCATGGGAGCAACGAGCAGACTGTT 50067
Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613
|| | || | | | || | | || |||||| | ||| | |||
Sbjct 50068 GCGGACACCATGCTCCTTGATCTGCTCCTTCAGAGAGTCCCAATCCCAAA--GGTCAGAG 50125
Query 65614 GTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671
| | ||||| | ||||| || | || ||| | || | || || ||
Sbjct 50126 GGCTTGACATTC------CACATGTCGTACTGGAGGATGCCCTGAGAAATAGGAGAGCCC 50179
Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGAC---AGCTGGTCTCGAGTGCG 65728
| | | ||| || ||||||||||| | ||| | | ||| || ||
Sbjct 50180 TCGTACGTGGAGTAGGTACCTTCCTCCTTGGCCAACTGAACCGACATAGTC---AGAGCA 50236
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTCTCGTA 65787
||| ||||||||||| || || | || || || ||||| |||||| ||| |
Sbjct 50237 GCATGGTAAATGGTCTCAAAGAT-CTTCTTGTTGAGGTCACGGGCCTCAGGAGATTCGAA 50295
Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847
||||| | | || |||| ||||| ||||| || || |||| ||||||||||||
Sbjct 50296 TGGCATGCGAAGGGCGAGGAAAGCATCGGCAAGACCCTGGACACCAAGACCGATGGGACG 50355
Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907
||||||| ||| | | |||||||| || ||||||| |||| ||| || ||
Sbjct 50356 GTGACGCATGTTGCTATTGCGGGCCTCAGGAACGGGGTAGTGGTTGACATCAATGATCTT 50415
Query 65908 ATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAATGT 65965
||||| ||||| || || || || | || | ||| ||| || ||
Sbjct 50416 GTTCAAGTTGCGAACGACGACCTGAGTGA--CCTCATGAAGCTTCTGGAAGTC-----GT 50468
Query 65966 TTAGGACGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023
| || ||| | ||| | || || | |||||||| ||||| || | ||
Sbjct 50469 AGAC-ACCCTCGTTGTAGT--------CAACGAAAGTAGGAAGGGCGAGAGAAGCCAAGT 50519
Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083
|||||||||| | ||| ||||| ||| ||||| | || || ||||| || || ||
Sbjct 50520 TGCAGACAGCGACCTCATCAGGGGCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGC 50579
Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143
||| |||||||| | |||| || || |||||||| || ||||||||||| | ||
Sbjct 50580 TGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGGCATCCTTGTAAAGCA 50639
Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203
|| | || |||| |||||| || | ||| | || |||| |||||| | ||||
Sbjct 50640 TGAAAGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAATTGCGTACCAAAGCTTCTGGGCCT 50699
Query 66204 TCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262
| | || | | | |||| || | || ||||| | ||||| | | |||||
Sbjct 50700 TGATGGT-CTTGCGACCCTTGCCCTCCCGCTCGTACTTCTCGTACAAGGCCTCGAACTCC 50758
Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322
|| || | || | ||||| || |||| | |||||||| || | ||| ||| |
Sbjct 50759 TCGCCGTAGCAGTCAGCCAGACCGGGGCACTCATTGGGACACATGAGGGTCCAGTCAGCG 50818
Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382
| || || || | ||| |||||||| || ||||||||||| ||| || |||||
Sbjct 50819 TTCTTCTCGACTCTCTTCATGAATAGATCGGGGATCCAGAGGGCAAGGAAAAGGTCGCGA 50878
Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442
|| || |||||| ||||||| || ||||||| || | ||||||||||| |||||
Sbjct 50879 GCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCCATGAACTCAAAGACATCGGCG 50938
Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502
||||| || || ||||| |||||||| | || ||| || |||||||| ||||||
Sbjct 50939 TGCCAGGGCTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTACCACCTTGATCGACG 50998
Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562
|||||||| || ||||||||||| | ||| || | || ||||| || |||| |||
Sbjct 50999 TAGCGAGCCGTGTTATTGAAGACACGAAGCATGGGGATGACTCCGTTCGAGGTGCCGTTG 51058
Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622
|||||| | || ||| || || || || ||| | || |||||||| ||||||
Sbjct 51059 GTGCCGGCAATATAGGAGCCAGTGGCACGGATGCGGTGGGCGTTGAGACCAATGCCACCG 51118
Query 66623 GCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC-TGTCCGGAATATGCCGTCAATGGAGT 66680
||| |||| ||||| || || || | |||| | | || || ||||||||||
Sbjct 51119 GCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTC--GTAGATACCCTCAATGGAGT 51176
Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740
| |||| ||| | |||| |||| ||| || ||| | || || |||| ||
Sbjct 51177 CTTCCTTCATGTCGACGAGGAAGCAAGAAGACAGCTGGCACTGAGGGGTACCGGCGTTGA 51236
Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800
|||| ||||| | ||||| || ||| | | || ||||| | ||||| ||||||||||
Sbjct 51237 AGAGTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCTCGATGA 51296
Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCC 66860
| |||| ||| || || || |||| |||| ||||| | | || || || |
Sbjct 51297 CGCGCTCAACGTTGTCACCCCAGATGCCGACTGCAACACGCATGATCATGTGCTGCGGTC 51356
Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920
||| | | | | | || | | || ||| || | ||||||||||||| || |
Sbjct 51357 TCTCGGCAATCTTGCCGTCGAGCTTGAGTAGGTATGATCTCTCCAGGGTCTTGAAGCCGA 51416
Query 66921 AGTACGAGTAATTGAAATCG 66940
|||| ||| ||||| |||
Sbjct 51417 AGTATTGGTAGTTGAAGTCG 51436
>seq179
Length=397792
Score = 178 bits (196), Expect = 1e-39
Identities = 588/904 (65%), Gaps = 68/904 (8%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| ||
Sbjct 380367 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 380426
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | ||| | ||| | | |||||
Sbjct 380427 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAT-GATGAGAAGTACTTCATCTC 380485
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| ||||| || ||||| |||||||||||||| | | || ||
Sbjct 380486 CCACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAATGAGAACCTCGTTGAGCG 380545
Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | ||||| || | | ||||| ||||| |||||||| |||||||| |
Sbjct 380546 CTTCA-GCGGCGAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 380604
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| | ||||| |||| ||| | |||||||| || ||||||| ||||| |
Sbjct 380605 TGGAGAACATTCACTCTGAGACCTACTCGCTACTCATCGACACCTACATCAAGGAGCCTG 380664
Query 61382 CGGAACG-----------TGAACG--ATTG-----------TTCA-ATGCCATCGA---- 61412
|| | || | |||| |||| || | ||| ||| |
Sbjct 380665 CGCAGCGCACGTACCTCTTTAACGCCATTGACACTAGTATGTTGACATGACATGTACTGT 380724
Query 61413 GA------CGATACCG-GCGGTGAAG-----------CG---GAAAGCGGATTGGGCCTT 61451
|| || || | || || || || ||| || || ||||||||
Sbjct 380725 GAATGCATCGCTAACTCGCATTGCAGTCCCCGCCATTCGCAAGAAGGCCGACTGGGCCTT 380784
Query 61452 CAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509
|| ||||||| | || | ||| | || | | || || | || || || |
Sbjct 380785 GAAATGGATCAGCG--ACGAGAGCTCATCCTTCGCCCAGCGTCTGGTTGCCTTCGCCGCT 380842
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || |||| ||| | || || ||| | ||||| |||||
Sbjct 380843 GTTGAGGGTATCTTCTTCAGCGGTGCGTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGT 380902
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||| |||||||||||| ||| ||| | || || |||||||||||| |||| |
Sbjct 380903 CTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTGCACACT 380962
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGGAGGAGCGTGT 61688
|| ||||| | ||||| | | || | || | | || || || || | |
Sbjct 380963 GACTTTGCC---TGCCTATTGTA-CTCTCACCTCAAGCACCGCCCCAACAAGCAGGTTAT 381018
Query 61689 GGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748
| || || || || ||||| | || || ||||| || ||||||| ||| ||||
Sbjct 381019 TGAGGACATCATTGTCGATGCGGTCAAGATTGAGCAGGAGTTCTTGACTGAGGCTCTGCC 381078
Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808
| | ||| |||||||||| | | ||| |||||| ||||| || ||||| ||
Sbjct 381079 TTGCGCTCTCCTCGGCATGAACTCCAACTTGATGAAGCAGTACATTGAGTTCGTTGCTGA 381138
Query 61809 CCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867
|||||| ||||||| | |||| | || || |||| || | ||||| || ||||
Sbjct 381139 CCGTCTCTTGGTCGCTCTTGGCAACGACAAGG-TCTACAAGTCTTCCAACCCCTTCGATT 381197
Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927
||||||| | ||||| || | || ||||| || || |||||||| ||||| | |||||
Sbjct 381198 TCATGGAGAACATTTCCCTCGGCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACT 381257
Query 61928 ATCA 61931
| ||
Sbjct 381258 ACCA 381261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566444639440
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