Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq113 89.7 2e-12
>seq113
Length=441198
Score = 89.7 bits (98), Expect = 2e-12
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
||||||| || | ||| || ||||||||||| ||||| | | |||||||| ||
Sbjct 310639 AGATGCGCTCGATGATAAGCTGGGCGATGCGGTCGCCCTCGGCAACCTCAAAGTCGGTGT 310698
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| | |||||||||||||| ||| ||||| ||| | || || | ||| ||||
Sbjct 310699 CGGCGTGGTTGAAGAGCAGGACCTTGACCTGGCCGCGGTAGTCGGCATCAATGACGCCGG 310758
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGT 21891
||||| ||||| |||||| |||| || || || | ||| |||||||||||||
Sbjct 310759 CGCCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCGGAGCGGGGGGCGACGCGGCCGT 310815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084730416733158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |