Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq682 109 2e-18 >seq682 Length=146227 Score = 109 bits (120), Expect = 2e-18 Identities = 183/264 (69%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 21629 AGAAACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTT 21688 ||| ||||| ||| |||| | || || |||||||| | |||| |||||||| Sbjct 29445 AGAGACACCGGTGCTGCCAAACCCGCCAGCGCCGCGCACGCTCTCCTCGAGCTCG----- 29499 Query 21689 TTGCGCCTGCTGCAAAA-CTGGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGAT 21747 ||| | | | | | ||||| ||||||| || | |||||| ||||||||||| | Sbjct 29500 --GCGACCTCGACGATCTCGGGGGTGAAGATGCGCTCAATGATGAGCTGGGCGATGCGGT 29557 Query 21748 CGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGC 21807 |||| | || ||||||||| ||| | |||||||||||| | ||| ||||| || Sbjct 29558 CGCCCTCGGCGACCTCAAAGTCCGTGTCGGCGTGGTTGAAGAGGAGGACCTTGACCTGGC 29617 Query 21808 CCCTATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGAC 21867 | | || ||||| ||| |||||||| ||||| |||||| |||| || | Sbjct 29618 CGCGGTAGTCGGCGTCGATGACGCCGGCGCCCGTGTCGATGAAGTTCTTGGAGGCGAGGC 29677 Query 21868 CCGATCTGGGAGCGACGCGGCCGT 21891 | || | ||| ||||||||||||| Sbjct 29678 CGGAGCGGGGGGCGACGCGGCCGT 29701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084663242527248