Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq1504 113 2e-19
>seq1504
Length=79373
Score = 113 bits (124), Expect = 2e-19
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484
|||| ||||||||||| ||||||| | |||| |||||||||||||| ||| || || |
Sbjct 15379 CAATGGTCATACGAGACGGAATGGCGTGAGGATTGATGATGATGTCCGGCGTGATACCCT 15438
Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
| ||||||||||||| ||||| | || ||| ||||||||| |||||||| | |
Sbjct 15439 CGCCGGTAAAGGGCATGTCTTCCTGCCGATAAGTGACACCAATGGTACCCTTTTGGCCGT 15498
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
|| || ||||| ||||| |||||
Sbjct 15499 GACGTGAGGCAAATTTGTCTCCAAT 15523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884819359302968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |