Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1504 113 2e-19 >seq1504 Length=79373 Score = 113 bits (124), Expect = 2e-19 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | |||| |||||||||||||| ||| || || | Sbjct 15379 CAATGGTCATACGAGACGGAATGGCGTGAGGATTGATGATGATGTCCGGCGTGATACCCT 15438 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||||||||||| ||||| | || ||| ||||||||| |||||||| | | Sbjct 15439 CGCCGGTAAAGGGCATGTCTTCCTGCCGATAAGTGACACCAATGGTACCCTTTTGGCCGT 15498 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || ||||| ||||| ||||| Sbjct 15499 GACGTGAGGCAAATTTGTCTCCAAT 15523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884819359302968