Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq725 77.0 2e-12 >seq725 Length=7169 Score = 77.0 bits (84), Expect = 2e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 2 AACCCAAAG-ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || || ||| ||||| |||||| |||||| | | ||| |||| |||| |||| || Sbjct 1969 AAGCCTAAGCACTTTAATTTCTTATAAGGTACTAAATAAGTTAAAAA-ATAATATCGTCC 1911 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||||| | |||||||| |||||||||||||||||||| ||||| || Sbjct 1910 GATCCCTAATTAATATAGTTTATAATTAAGACTACGACGGTATCTAATCGTTTT 1857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397575310