Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq725 77.0 2e-12
>seq725
Length=7169
Score = 77.0 bits (84), Expect = 2e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 2 AACCCAAAG-ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| || ||| ||||| |||||| |||||| | | ||| |||| |||| |||| ||
Sbjct 1969 AAGCCTAAGCACTTTAATTTCTTATAAGGTACTAAATAAGTTAAAAA-ATAATATCGTCC 1911
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||||||| | |||||||| |||||||||||||||||||| ||||| ||
Sbjct 1910 GATCCCTAATTAATATAGTTTATAATTAAGACTACGACGGTATCTAATCGTTTT 1857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278397575310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |