Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq725 141 4e-31
>seq725
Length=7169
Score = 141 bits (156), Expect = 4e-31
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86
|||||| || |||||| ||| |||| ||||| | ||||||| ||| || |||| |
Sbjct 3393 AAGCTCTTTTAACGAGTTAAGTAGTTTAGGAATACTATTCTAAATAGGAAATATATTTTT 3452
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
| |||| ||||||||| || |||||||||||| | ||||||| | || ||| || ||
Sbjct 3453 TTTAAAACTAAATATTAGCTAGAGACCGATAGTATATAAGTAGAATAATTAAAAAATAAA 3512
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| | ||| |||||| |||||| || |||| ||||| || ||| |||||||||| ||
Sbjct 3513 AAGTATTTTAAAAAGAGGGTTAAATAGTACGTAAAATTATTAAAAAGGAAGCGCTTATAA 3572
Query 207 CCAGACTT 214
| ||||||
Sbjct 3573 CTAGACTT 3580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079980072950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |