Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq572 340 1e-88
seq686 138 9e-28
>seq572
Length=609512
Score = 340 bits (376), Expect = 1e-88
Identities = 1226/1891 (65%), Gaps = 74/1891 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | || ||| |||| || | || ||||||||||| |||
Sbjct 16428 TCGACGGTGAACTGAATAGGGGCAGAAGCTGCCTGCGTACGCAGGTAGTACATGCCCGTC 16487
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
||||| ||| ||| | ||| ||||| || | || |||| | | |||| ||
Sbjct 16488 TTGAGACCAAGCTTCCAGCCGGCGAAGTGCATAC-TGGTGATCTTGCCCATTGTCGGGTC 16546
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||||| ||| |||||| | |||||| || ||||||||
Sbjct 16547 CTTCATGTGGATGTTAAGGGACTGGGACTGGTCGATGAAGGCACCACGGTCGGCAGCCAT 16606
Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312
| ||| | | || | |||||||||||||||||||||||||| | | | ||||
Sbjct 16607 CTGAACAACGGTGCGCTGG---GATATCTCCCAGACGGTCTTGTACAGA-GCCTTGACCT 16662
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372
|| ||||| | |||| ||||| ||||| || || || || || ||
Sbjct 16663 CAGCGGGAATGTTGGGGATGTTCTGGATAGAACCGTTCTCGGCGATGATACGGTTCTTCA 16722
Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432
| | || ||||||| |||| |||| |||| | | ||| | || | || |
Sbjct 16723 TGGCATCGGACCACAGGCCCATGTCGACGAGATCCTTCAACAACCAGGGGTTAACAACCT 16782
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||||| || |||||||| ||||||||||| ||| || || ||| | |
Sbjct 16783 GGAACTCGCCGGCAAGAACACGACGTTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACT 16842
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
| ||||||| | || || | ||| || ||||| ||||||||||| || | ||| ||
Sbjct 16843 CGTTGTTGCCCAAGATCTGCGAAGTGGAGGCAGTAGGCATGGGAGCAACGAGCAAACTGT 16902
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612
| |||| |||| | | || | | || |||||| | ||| | |||
Sbjct 16903 TGCGCACACCGTGCTCCTTGATCTGCTCCTTCAGAGAGTCCCAATCCCAGA--GGTCAGA 16960
Query 65613 CGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT----G 65666
| | ||||| | ||||| || | || ||| | || |||| | | |
Sbjct 16961 GGGCTTGACATTC------CACATGTCGTACTGGAGGATACC----CTGGGAGATAGGGG 17010
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGA-CAGC--TGGTCTCGA 65723
| || | | | ||| |||||||||||||| || ||| ||| ||||| |
Sbjct 17011 AGCCCTCGTACGTGGAGTAGGTGCCCTCCTCCTTGGCCAGCTGAACAGACATGGTC---A 17067
Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGA-TTAAGTTCACGTGCCTCATCGCTC 65782
| || || || ||||||||||| || | || || || ||||| ||||| |
Sbjct 17068 GAGCAGCGTGGTAGATGGTCTCGAAGAT-CTTCTTGTTGAGATCACGGGCCTCGGGAGAC 17126
Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842
||| | ||||| | | || |||| || || ||||| || || || | ||| |||
Sbjct 17127 TCGAAAGGCATGCGAAGGGCGAGGAAAGCATCAGCAAGACCCTGGACACCGAGACCAATG 17186
Query 65843 GGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902
|| || ||||||| ||| | ||||| || || ||||||| |||| ||| ||
Sbjct 17187 GGGCGGTGACGCATGTTGCTGTTGCGAGCCTCGGGAACGGGGTAGTGGTTGACATCAATG 17246
Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAA 65960
|| ||||| ||||| || || || || | ||| | ||| ||| ||
Sbjct 17247 ATCTTGTTCAAGTTGCGAACAACGACCTGAGTGA--CCTCGTGAAGCTTCTGGAAGTC-- 17302
Query 65961 AATGTTTAGGACGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018
|| | || |||| | ||| | || || |||| || ||||| || ||
Sbjct 17303 ---GTAGAC-ACCATCGTTGTAGT--------CAACGAAGGTGGGCAGAGCAAGGGAAGC 17350
Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078
| |||||||||||| | |||||| || ||| ||||| | || || ||||| || ||
Sbjct 17351 CAAGTTGCAGACAGCGACCTCGTCGGGTGCGCAGTACTCAATGATCTCAGTGCAGAGGTT 17410
Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138
|| ||| || || || | |||| || || |||||||| ||| |||||||||||
Sbjct 17411 GGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTA 17470
Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCG 66198
| |||| | || |||| ||||| || | ||| | |||||| | |||||| |
Sbjct 17471 AAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG 17530
Query 66199 TGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGA 66257
||||| | || | | | |||| || | ||| ||||| | ||||| | | ||||
Sbjct 17531 GGCCTTGATGGT-CTTGCGACCCTTGCCCTCGCGCTCGTACTTCTCGTACAAGGCCTCGA 17589
Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317
| || || | || | ||| | || |||| | || ||||| || | ||| |
Sbjct 17590 ACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCATTGGGGCACATGAGGGTCCAGT 17649
Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377
| | | || || || | ||| || ||||| || |||||||| ||| ||| || |
Sbjct 17650 CGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGAGCGAGGAAAAGGT 17709
Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437
| || || || |||||| |||| || || ||||||||||| | |||||| |||| ||
Sbjct 17710 CACGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGCAAGTCCATGAACTCGAAGACGT 17769
Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497
|||| ||||| || || |||||||| ||||| | ||| ||| ||| |||||| || |
Sbjct 17770 CGGCGTGCCAGGGCTCAAGGTAGATAGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGAT 17829
Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557
||||||||||||| ||||| |||||||| | ||| || | || ||||| || |||
Sbjct 17830 CGACGTAGCGAGCAGTGTTGTTAAAGACACGAAGCATGGGAATGACACCGTTCGAGGTGC 17889
Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATAC 66617
| |||||||| | || ||| || || || ||| |||| | || |||||||| |
Sbjct 17890 CGTTGGTGCCTGCAATATAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGACCAATGC 17949
Query 66618 CACCGGCCGTCTTCGAGATGGCAGCACAA-TCG-GCCACTGTCCGGAATATGCCGTCAAT 66675
|||| ||| |||| ||||| || || || | |||| | | || || |||||
Sbjct 17950 CACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTC--GTAGATACCCTCAAT 18007
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
||||| |||| ||| | |||| |||||||| || ||| | || || | ||
Sbjct 18008 AGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACCAGC 18067
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
|||||| ||||| | ||||| || ||| | | || |||||| ||||| |||||
Sbjct 18068 GTTGAAGAGTGTGGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTC 18127
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855
|||||| || | ||| || || || |||| |||| ||||| | | || ||
Sbjct 18128 GATGACGCGCTCGACGTTATCACCCCAGATGCCGACTGCAACACGCATGATCATGTGCTG 18187
Query 66856 AGGCCGTTCGACCAGC---CGATC---CTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909
|| | ||| | | | | ||| ||||| || | ||| || | |||||||||
Sbjct 18188 GGGTCTCTCGGCAATCTTGCCATCAAGCTTGA---GC---AGGTATGATCTTTCCAGGGT 18241
Query 66910 CTTGATACCAAAGTACGAGTAATTGAAATCG 66940
||||| || ||||| ||| ||||| |||
Sbjct 18242 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCG 18272
>seq686
Length=266282
Score = 138 bits (152), Expect = 9e-28
Identities = 209/296 (71%), Gaps = 5/296 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || |||||||||||||| | |||||| | ||| |
Sbjct 149380 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 149321
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | ||| | ||| | | |||||
Sbjct 149320 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAT-GATGAGAAGTACTTCATCTC 149262
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | | || ||||| ||||| ||||||||||||||||| ||||| | | || ||
Sbjct 149261 TCACATTCTTGCCTTCTTCGCCGCATCGGACGGTATCGTCAACGAGAACCTCGTCGAGCG 149202
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| | ||||| || || | ||||| || || ||||||||||||||||| ||
Sbjct 149201 CTTCTCCGGCGAGGTCCAGGTCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 149142
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||||| ||||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 149141 GGAGAACATCCACTCTGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGC 149086
Score = 125 bits (138), Expect = 6e-24
Identities = 335/503 (67%), Gaps = 13/503 (3%)
Strand=Plus/Minus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGT-ACAACGGCTACATTTGGTGAACGAT 61492
||| || || |||||| | || ||||||| | | | ||| || | || | | ||
Sbjct 148977 GAAGGCTGACTGGGCCCTGAAGTGGATCAGCGATGAGAACTCCTCC-TTCGCCCAGCGTC 148919
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
|| | || ||||| | || |||||| | || ||||| || | |||||| | |||||||
Sbjct 148918 TGGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTTT 148859
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| | ||||| ||||| || ||||| |||||||||||| ||| ||| | || || || |
Sbjct 148858 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCCCGTG 148799
Query 61613 ACGAGGGCATGCATTGTGATTTTG-CTG--TTTTGCTATTCAAACGCTATCTGGTGAATC 61669
||||||| | || || |||| ||| | ||| || || || || | | |
Sbjct 148798 ACGAGGGTCTTCACACCGACTTTGCCTGCCTCTTG-TACTCTCAC-----CTCAAGCACC 148745
Query 61670 GTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAAT 61729
| || || || | | || || | ||| || || | || || ||||| |
Sbjct 148744 GCCCCAACAAGCAGGTCATTGAGGACATCATCGTTGATGCCGTCAAGATTGAGCAGGAGT 148685
Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789
| || ||||| ||| ||||| | | || |||||||||| | | ||| |||||
Sbjct 148684 TCCTCACTGAGGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAACTTGATGAAGCAGT 148625
Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAAT 61848
| ||||| || ||||||||||| || |||||| | |||| | || || |||| ||
Sbjct 148624 ACATTGAGTTCGTTGCCGACCGCCTCCTGGTCGCTCTTGGCAACGACAAGG-TCTACAAG 148566
Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908
| ||||| || || |||||||| | || || || | |||||||| || || ||
Sbjct 148565 TCTTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTT 148506
Query 61909 GAGAAACGTGTAGGCGACTATCA 61931
||||| ||||| | ||||| ||
Sbjct 148505 GAGAAGCGTGTCGCTGACTACCA 148483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563498660560
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