Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq121 104 1e-16
>seq121
Length=229515
Score = 104 bits (114), Expect = 1e-16
Identities = 129/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
||||||| || | |||||| ||||||||||| ||||| | || |||||| || ||
Sbjct 193173 AGATGCGCTCGATGATGAGCTGGGCGATGCGGTCGCCCTCAGCGACTTCAAAATCGGTGT 193114
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| | |||||||||||| | ||| ||||| ||| | || ||||| ||| ||||
Sbjct 193113 CGGCGTGGTTGAAGAGGAGGACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCGG 193054
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGT 21891
||||| ||||| |||||| |||| || || || | |||||| ||||||||||
Sbjct 193053 CGCCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCAGAGCGGGGAGCAACGCGGCCGT 192997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084713780514342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |