Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq121 104 1e-16 >seq121 Length=229515 Score = 104 bits (114), Expect = 1e-16 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774 ||||||| || | |||||| ||||||||||| ||||| | || |||||| || || Sbjct 193173 AGATGCGCTCGATGATGAGCTGGGCGATGCGGTCGCCCTCAGCGACTTCAAAATCGGTGT 193114 Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834 | | |||||||||||| | ||| ||||| ||| | || ||||| ||| |||| Sbjct 193113 CGGCGTGGTTGAAGAGGAGGACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCGG 193054 Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGT 21891 ||||| ||||| |||||| |||| || || || | |||||| |||||||||| Sbjct 193053 CGCCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCAGAGCGGGGAGCAACGCGGCCGT 192997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084713780514342