Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq673 109 2e-18 >seq673 Length=46916 Score = 109 bits (120), Expect = 2e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||| | | |||| |||||||| ||||| ||| ||||| | Sbjct 30439 CAATGGTCATACGAGACGGAATTGCGTGAGGATTGATGATAATGTCCGGCGTGATGCCCT 30380 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||||||||||||||||||| | || ||| ||||||||| ||||| || | | Sbjct 30379 CGCCGGTAAAGGGCATATCTTCTTGCCGATAAGTGACACCAATGGTACCCTTCTGGCCGT 30320 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 || || |||||||| || ||||| Sbjct 30319 GACGTGAGGCAAACTTATCACCAAT 30295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884863964550597