Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq929 369 2e-99
>seq929
Length=1366
Score = 369 bits (408), Expect = 2e-99
Identities = 266/307 (87%), Gaps = 4/307 (1%)
Strand=Plus/Plus
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436
|| ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||
Sbjct 2 GCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCA 61
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
| | | | ||||||||||||||||| |||||| | ||||||||||||||||||| |||||
Sbjct 62 ACCTTATGTGCGAGTGTTTGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTG 121
Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
|| | || ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 122 AGAGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGA 177
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
||||| | | |||||||||||| |||||||||||| || |||||||||||||||||||
Sbjct 178 GCATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTATAGGGTGAAGCCAGAGGA 237
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 238 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGCGCATG 297
Query 677 GGGGCGA 683
|||||||
Sbjct 298 GGGGCGA 304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079965143750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |