Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq929 369 2e-99 >seq929 Length=1366 Score = 369 bits (408), Expect = 2e-99 Identities = 266/307 (87%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 || ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| Sbjct 2 GCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTCA 61 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 | | | | ||||||||||||||||| |||||| | ||||||||||||||||||| ||||| Sbjct 62 ACCTTATGTGCGAGTGTTTGGGTGTTAAACCCCTACGCGTAATGAAAGTGAACGCAGGTG 121 Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 || | || ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 122 AGAGCTTC----GGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGA 177 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||||| | | |||||||||||| |||||||||||| || ||||||||||||||||||| Sbjct 178 GCATATAGGGTTGGACCCGAAAGAAGGTGAACTATGCGTGTATAGGGTGAAGCCAGAGGA 237 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||||||||||||||||||||||||||||| ||||||||||||||||||||| || | || Sbjct 238 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGCGCATG 297 Query 677 GGGGCGA 683 ||||||| Sbjct 298 GGGGCGA 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079965143750