Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq966 96.9 1e-17
>seq966
Length=3452
Score = 96.9 bits (106), Expect = 1e-17
Identities = 135/188 (72%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| |||||||| | ||||||| | |||||| || | | ||||||
Sbjct 2509 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 2450
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC-----GGATT 419
| |||||| |||| | ||| |||| || ||| | | | | || |||||
Sbjct 2449 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAAAGGATATAAATTATACAAGGATT 2390
Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479
|||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| |
Sbjct 2389 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 2330
Query 480 CGGTGAAT 487
||||||||
Sbjct 2329 CGGTGAAT 2322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503975560000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |