Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq966 96.9 1e-17 >seq966 Length=3452 Score = 96.9 bits (106), Expect = 1e-17 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| |||||||| | ||||||| | |||||| || | | |||||| Sbjct 2509 CAAGTCATCATGGCCCTTATGTTGTGGGCTATAGACGTGCCACGTAGTCCTTAACAAAGA 2450 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC-----GGATT 419 | |||||| |||| | ||| |||| || ||| | | | | || ||||| Sbjct 2449 GATGCGAAAATGCGAATTTTAGCTAATCTCAAAAAAAAGGATATAAATTATACAAGGATT 2390 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 |||||||| |||||||||||||||| | ||| ||||||||||| |||| |||| | Sbjct 2389 GTAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCA 2330 Query 480 CGGTGAAT 487 |||||||| Sbjct 2329 CGGTGAAT 2322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503975560000