Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq399 212 1e-52 >seq399 Length=1204 Score = 212 bits (234), Expect = 1e-52 Identities = 148/166 (89%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 94 AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAG 152 |||| ||||||||||||||||||| || | ||| || | || |||||||||||||| Sbjct 1204 AGCCGATAGTCCCTCTAAGAAGCCGGCGTACTGCCAAAG-CAATACGGGCTATTTAGCAG 1146 Query 153 GTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGG 212 || ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1145 GTCAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGG 1086 Query 213 CCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 1085 CCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796787456625