Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq441 154 8e-36 seq207 86.0 3e-15 >seq441 Length=6970 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| || | || || || Sbjct 3262 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATCAT-AGAATCCCGTCC 3320 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3321 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3377 >seq207 Length=60267 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 2 AACCCAAAG-ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || || ||| ||||| |||||| ||||||||| | |||||||| |||| || | | Sbjct 46557 AAGCCTAAGCACTTTAATTTCTTATAAGGTGCCAAATAAGTCAAAAA-ATAATATTGTCT 46499 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||||||||||||||| ||||||||||| | |||||| || |||| Sbjct 46498 AATCCCTAGTCGGCATAGTTTATAGTTAAGACTACAATAGTATCTAATTATCTT 46445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398569720