Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq276 77.0 5e-12
>seq276
Length=27860
Score = 77.0 bits (84), Expect = 5e-12
Identities = 75/97 (77%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||| | |||| | |||||| ||| | | || |||||||| |||||||| | ||||||
Sbjct 23120 TGGCCCTCCTTATTCCGAAGGTACAGAGTCAATTTGCCGAGTTCCTTAATGATTGTTCAC 23061
Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
| |||||||| ||||||||||| || || |||||
Sbjct 23060 TCAAACGCCTTTGTATTCTCTACTTGCTTACTTGTGT 23024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694396313604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |