Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq276 77.0 5e-12 >seq276 Length=27860 Score = 77.0 bits (84), Expect = 5e-12 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||| | |||| | |||||| ||| | | || |||||||| |||||||| | |||||| Sbjct 23120 TGGCCCTCCTTATTCCGAAGGTACAGAGTCAATTTGCCGAGTTCCTTAATGATTGTTCAC 23061 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | |||||||| ||||||||||| || || ||||| Sbjct 23060 TCAAACGCCTTTGTATTCTCTACTTGCTTACTTGTGT 23024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694396313604