Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq276 84.2 5e-14 >seq276 Length=27860 Score = 84.2 bits (92), Expect = 5e-14 Identities = 107/147 (73%), Gaps = 8/147 (5%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||| ||| | ||| ||||||||| ||| | || | ||||||| ||| |||| Sbjct 23451 ATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC----ATCG 23396 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||| | | ||| ||| || | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 23395 TTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCT 23336 Query 125 TATAGTTACGGCCGCCGTTTACTGGGG 151 |||| || ||||||| || | |||| Sbjct 23335 CATAGGTAAGGCCGCCATTAATCGGGG 23309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062394178048