Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq276 73.4 7e-11 >seq276 Length=27860 Score = 73.4 bits (80), Expect = 7e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || ||| |||| ||||||| |||||||||| |||| || ||| ||||||||| Sbjct 17854 TTACCGTCTACTTACCCTTTAAACCCAATAAAGATAACTAACACTAGCCTTCTACGTATT 17795 Query 245 ACCGCGGCTGCTGGCACGTAGTT 267 |||||| |||||||||||||||| Sbjct 17794 ACCGCGACTGCTGGCACGTAGTT 17772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828795600108