Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq276 87.8 4e-15 >seq276 Length=27860 Score = 87.8 bits (96), Expect = 4e-15 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 |||||||| | |||| | | |||| | |||| ||||||| || |||||||||| Sbjct 17905 GAATTCCTGGAGTAGAGATAAAATTTTTTGATACCAGGAGGACTGTCAACGGCGAAGGCG 17964 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || |||||||| |||| |||| || |||| ||||||||||||||||| Sbjct 17965 TCCTTCTATGTAATAACTGACGTTGAGAGACGAAGGCTTGGGTAGCAAACAGGATTAGAT 18024 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||| ||||||| || | || ||||||| Sbjct 18025 ACCCTAATAGTCCAAGCAGACAATGATGAAT 18055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203193406464