Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017-
01-13] 548 sequences; 64,848,627 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq441 836 0.0
seq207 493 4e-137
>seq441
Length=6970
Score = 836 bits (926), Expect = 0.0
Identities = 489/505 (97%), Gaps = 1/505 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||
Sbjct 3848 GTTCTCATTCCAATTACGAGACCCGAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 3907
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3908 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3967
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3968 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 4027
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4028 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 4087
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4088 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCGTTGGT 4147
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 4148 TTTTTATCTAATAAATACACCCCTTCCTGAAGTCGGGGTTTGTAGCATGTATTAGCTCTA 4207
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4208 GAATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 4267
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||
Sbjct 4268 AGCCATTCGCAGTTTCACAGTATAAAGTGCTTATACTTAGACATGCATGGCTTAATCTTT 4327
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 4328 GAGACAAGCATATGACTACTGGCAG 4352
>seq207
Length=60267
Score = 493 bits (546), Expect = 4e-137
Identities = 412/503 (82%), Gaps = 1/503 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| ||||||||
Sbjct 8009 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 7950
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| |||| ||||| |||||||| || |||||||||||||||| ||||| ||||| ||||
Sbjct 7949 CCTGTGTTAGGATTAGGTAATTTACGTGCCTGCTGCCTTCCTTAGATGTAGTAGCTGTTT 7890
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | | |||||| | | ||||| || | ||| |||
Sbjct 7889 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAATTATGCTAG 7830
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
||||| || || |||||| |||||| |||||||||||| ||| || || ||
Sbjct 7829 AACACTACTTTAGTATTAAAAGTTAATAGGGAAGAAATTTGAATAAACTATTGCTAGCGT 7770
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
|||||||| |||| |||||||||||||| || | ||||| ||||| || |||
Sbjct 7769 AAGGCCATATGATTTAAGAAGTTATTATGAATTACTAGTAAGCCCTAAAGGGTATTAGTT 7710
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||
Sbjct 7709 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGTATGTATTAGCTCTAGA 7650
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | ||||||| | |||||||||||||||||||||||| |||||| || |||| ||
Sbjct 7649 ATTACTATGGTTATCTAAGTAGTAAGGTACTATCAAATAAACAATAACTTATATAATAAG 7590
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 7589 CCATTCGCAGTTTTGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 7531
Query 482 GACAAGCATATGACTACTGGCAG 504
|||||| ||||||||||||| ||
Sbjct 7530 GACAAGTATATGACTACTGGTAG 7508
Score = 403 bits (446), Expect = 5e-110
Identities = 389/498 (78%), Gaps = 1/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| ||||||||
Sbjct 45970 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 45911
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| |||| ||||| |||||||| |||| ||||||||||| ||| | ||||| |||
Sbjct 45910 CCTGTGTTAGGATTAGGTAATTTATATGCCTACTGCCTTCCTTAGATATAGTAGCTATTT 45851
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | | |||||| | | ||||| || || || |||
Sbjct 45850 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 45791
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
||||| ||| ||| |||||| |||||| |||||||| ||| |||||| | ||
Sbjct 45790 AACACTACTCTAGCATTAAAAGTTAATAGGGAAGAAATTTAAATAAACCATTACTAGCGT 45731
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
|||||||| |||||| |||||||||| ||| || | ||||| ||||| || |||
Sbjct 45730 AAGGCCATACGATTCAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 45671
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct 45670 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGCATATATTAGCTCTAGA 45611
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| ||
Sbjct 45610 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 45551
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| |
Sbjct 45550 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 45492
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 45491 GATAAGTATATAACTACT 45474
Score = 358 bits (396), Expect = 2e-96
Identities = 379/498 (76%), Gaps = 1/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | ||||||||
Sbjct 27735 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 27676
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| ||| ||||| |||||||| |||| || |||||||| ||| | ||||| ||||
Sbjct 27675 CCTATGTTAGGATTAGGTAATTTATATGCCTACTACCTTCCTTAGATATAGTAGCTGTTT 27616
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||| | | || | | | |||||| | | ||||| || || || |||
Sbjct 27615 CTTAGGCTTCTTTTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 27556
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|||| ||| || |||||| |||||| |||||||| ||| ||| || || ||
Sbjct 27555 AATACTACTCTAGTATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACCAGCAT 27496
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || |||| |||||||||| ||| || | ||||| |||||| || |||
Sbjct 27495 AAGGCTATATGATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGCATTAGTT 27436
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| ||||||||||||||||||||| |||| |||||||||| || |||||||| ||||
Sbjct 27435 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTAGCTTTAGA 27376
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| ||
Sbjct 27375 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 27316
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| || |||| ||| |||||||||||| || || ||||||||||| |
Sbjct 27315 CTATTTATAGTTTTGCTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 27257
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 27256 GATAAGTATATAACTACT 27239
Score = 358 bits (396), Expect = 2e-96
Identities = 379/498 (76%), Gaps = 1/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| ||||||||
Sbjct 36484 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 36425
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| ||| ||||| |||||||| | || | || |||||||| ||| | ||||| ||||
Sbjct 36424 CCTATGTTAGGATTAGGTAATTTATGTGCTTACTACCTTCCTTAGATATAGTAGCTGTTT 36365
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | | |||||| | | ||||| || || || |||
Sbjct 36364 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 36305
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|||| ||| || |||||| |||||| |||||||| ||| ||| || | ||
Sbjct 36304 AATACTACTCTAGTATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACTAGCGT 36245
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||| |||||||||| ||| || | ||||| ||||| || |||
Sbjct 36244 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 36185
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| |||||||| |||| |||||||||| || |||||||||||||
Sbjct 36184 TTTAATCTAATAAATATACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTAGCTCTAGA 36125
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| ||
Sbjct 36124 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 36065
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| || |||| ||| |||||||||||| || || ||||||||||| |
Sbjct 36064 CTATTTATAGTTTTGCTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 36006
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 36005 GATAAGTATATAACTACT 35988
Score = 358 bits (396), Expect = 2e-96
Identities = 379/498 (76%), Gaps = 1/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | ||||||||
Sbjct 54747 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 54688
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| ||| ||||| |||||||| || ||| ||||||||||| ||||| ||||| |||
Sbjct 54687 CCTATGTTAGGATTAGGTAATTTACGTACCTACTGCCTTCCTTAGATGTAGTAGCTATTT 54628
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| |||| | | | |||||| | | ||||| || || || |||
Sbjct 54627 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 54568
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|||| ||| ||| |||||| |||| | |||||||| ||| ||| || | |
Sbjct 54567 AATACTACTCTAGCATTAAAAGTTAATAGAGAAGAAATTTAAATAAACTATTACTAGTGT 54508
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
||||| || ||| |||||||||| ||| || | ||||| ||||| || |||
Sbjct 54507 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 54448
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| |||||||| |||| |||||||||| || ||||| |||||||
Sbjct 54447 TTTAATCTAATAAATATACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTATCTCTAGA 54388
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| ||
Sbjct 54387 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 54328
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| |
Sbjct 54327 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 54269
Query 482 GACAAGCATATGACTACT 499
|| ||| |||| ||||||
Sbjct 54268 GATAAGTATATAACTACT 54251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510391723008
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