Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F001951195.1_202017- 01-13] 548 sequences; 64,848,627 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq441 836 0.0 seq207 493 4e-137 >seq441 Length=6970 Score = 836 bits (926), Expect = 0.0 Identities = 489/505 (97%), Gaps = 1/505 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| Sbjct 3848 GTTCTCATTCCAATTACGAGACCCGAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 3907 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3908 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3967 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3968 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 4027 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4028 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 4087 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4088 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCGTTGGT 4147 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 4148 TTTTTATCTAATAAATACACCCCTTCCTGAAGTCGGGGTTTGTAGCATGTATTAGCTCTA 4207 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4208 GAATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 4267 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| Sbjct 4268 AGCCATTCGCAGTTTCACAGTATAAAGTGCTTATACTTAGACATGCATGGCTTAATCTTT 4327 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 4328 GAGACAAGCATATGACTACTGGCAG 4352 >seq207 Length=60267 Score = 493 bits (546), Expect = 4e-137 Identities = 412/503 (82%), Gaps = 1/503 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| |||||||| Sbjct 8009 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 7950 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || |||| ||||| |||||||| || |||||||||||||||| ||||| ||||| |||| Sbjct 7949 CCTGTGTTAGGATTAGGTAATTTACGTGCCTGCTGCCTTCCTTAGATGTAGTAGCTGTTT 7890 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | | |||||| | | ||||| || | ||| ||| Sbjct 7889 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAATTATGCTAG 7830 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||||| || || |||||| |||||| |||||||||||| ||| || || || Sbjct 7829 AACACTACTTTAGTATTAAAAGTTAATAGGGAAGAAATTTGAATAAACTATTGCTAGCGT 7770 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 |||||||| |||| |||||||||||||| || | ||||| ||||| || ||| Sbjct 7769 AAGGCCATATGATTTAAGAAGTTATTATGAATTACTAGTAAGCCCTAAAGGGTATTAGTT 7710 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| ||||||||||||||||||||| |||| |||||||||| |||||||||||||||| Sbjct 7709 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGTATGTATTAGCTCTAGA 7650 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | ||||||| | |||||||||||||||||||||||| |||||| || |||| || Sbjct 7649 ATTACTATGGTTATCTAAGTAGTAAGGTACTATCAAATAAACAATAACTTATATAATAAG 7590 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 7589 CCATTCGCAGTTTTGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 7531 Query 482 GACAAGCATATGACTACTGGCAG 504 |||||| ||||||||||||| || Sbjct 7530 GACAAGTATATGACTACTGGTAG 7508 Score = 403 bits (446), Expect = 5e-110 Identities = 389/498 (78%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| |||||||| Sbjct 45970 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 45911 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || |||| ||||| |||||||| |||| ||||||||||| ||| | ||||| ||| Sbjct 45910 CCTGTGTTAGGATTAGGTAATTTATATGCCTACTGCCTTCCTTAGATATAGTAGCTATTT 45851 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | | |||||| | | ||||| || || || ||| Sbjct 45850 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 45791 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||||| ||| ||| |||||| |||||| |||||||| ||| |||||| | || Sbjct 45790 AACACTACTCTAGCATTAAAAGTTAATAGGGAAGAAATTTAAATAAACCATTACTAGCGT 45731 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 |||||||| |||||| |||||||||| ||| || | ||||| ||||| || ||| Sbjct 45730 AAGGCCATACGATTCAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 45671 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| Sbjct 45670 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGCATATATTAGCTCTAGA 45611 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||| ||| ||||||| |||||| || |||| || Sbjct 45610 ATTACTATAGTTATCTAAGTAGTAAGGTATTATTAAATAAATAATAACTTATATAATAAG 45551 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| | Sbjct 45550 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 45492 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 45491 GATAAGTATATAACTACT 45474 Score = 358 bits (396), Expect = 2e-96 Identities = 379/498 (76%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 27735 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 27676 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||| ||||| |||||||| |||| || |||||||| ||| | ||||| |||| Sbjct 27675 CCTATGTTAGGATTAGGTAATTTATATGCCTACTACCTTCCTTAGATATAGTAGCTGTTT 27616 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||| | | || | | | |||||| | | ||||| || || || ||| Sbjct 27615 CTTAGGCTTCTTTTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 27556 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| ||| || |||||| |||||| |||||||| ||| ||| || || || Sbjct 27555 AATACTACTCTAGTATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACCAGCAT 27496 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || |||| |||||||||| ||| || | ||||| |||||| || ||| Sbjct 27495 AAGGCTATATGATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGCATTAGTT 27436 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| ||||||||||||||||||||| |||| |||||||||| || |||||||| |||| Sbjct 27435 TTTAATCTAATAAATACACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTAGCTTTAGA 27376 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| || Sbjct 27375 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 27316 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| || |||| ||| |||||||||||| || || ||||||||||| | Sbjct 27315 CTATTTATAGTTTTGCTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 27257 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 27256 GATAAGTATATAACTACT 27239 Score = 358 bits (396), Expect = 2e-96 Identities = 379/498 (76%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||||| |||||||| Sbjct 36484 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTGTTACTACCTC 36425 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||| ||||| |||||||| | || | || |||||||| ||| | ||||| |||| Sbjct 36424 CCTATGTTAGGATTAGGTAATTTATGTGCTTACTACCTTCCTTAGATATAGTAGCTGTTT 36365 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | | |||||| | | ||||| || || || ||| Sbjct 36364 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 36305 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| ||| || |||||| |||||| |||||||| ||| ||| || | || Sbjct 36304 AATACTACTCTAGTATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTACTAGCGT 36245 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| |||||||||| ||| || | ||||| ||||| || ||| Sbjct 36244 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 36185 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| |||||||| |||| |||||||||| || ||||||||||||| Sbjct 36184 TTTAATCTAATAAATATACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTAGCTCTAGA 36125 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| || Sbjct 36124 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 36065 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| || |||| ||| |||||||||||| || || ||||||||||| | Sbjct 36064 CTATTTATAGTTTTGCTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 36006 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 36005 GATAAGTATATAACTACT 35988 Score = 358 bits (396), Expect = 2e-96 Identities = 379/498 (76%), Gaps = 1/498 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| ||||||||||| ||| |||||||||| | |||||||| Sbjct 54747 TACTTATTCTAATTATAAGACCTAAAAGAGCCCTATATTAGTATTTATTATTACTACCTC 54688 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||| ||||| |||||||| || ||| ||||||||||| ||||| ||||| ||| Sbjct 54687 CCTATGTTAGGATTAGGTAATTTACGTACCTACTGCCTTCCTTAGATGTAGTAGCTATTT 54628 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||| |||| | | | |||||| | | ||||| || || || ||| Sbjct 54627 CTTAGGCTCCTTCTCTAGGGTTAAGCCCTAACCCTCTATTACCTATTATAACTATACTAG 54568 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| ||| ||| |||||| |||| | |||||||| ||| ||| || | | Sbjct 54567 AATACTACTCTAGCATTAAAAGTTAATAGAGAAGAAATTTAAATAAACTATTACTAGTGT 54508 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || ||| |||||||||| ||| || | ||||| ||||| || ||| Sbjct 54507 AAGGCTATATAATTTAAGAAGTTATTATAAATTACTAGTAAGCCCTAAAGGGTATTAGTT 54448 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 ||| |||||||||||| |||||||| |||| |||||||||| || ||||| ||||||| Sbjct 54447 TTTAATCTAATAAATATACCCCTTCTAAAGTTAGGGTTTTTAGTATATATTATCTCTAGA 54388 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| | |||||| | ||||||||||||||| ||||||| |||||| || |||| || Sbjct 54387 ATTACTATAGTTATCTAAGTAGTAAGGTACTATTAAATAAATAATAACTTATATAATAAG 54328 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||| ||||| ||| |||| ||| |||||||||||| || || ||||||||||| | Sbjct 54327 CTATTTATAGTTTTACTATATA-ATTACTTATACTTAGATATATATAGCTTAATCTTTAA 54269 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 54268 GATAAGTATATAACTACT 54251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391723008